RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 COMMD1Q8N668 190 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 MS4A7Q9GZW8 240 aaPredicted RBP8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 KCNAB3O43448 404 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 GNG10P50151 68 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 ID3Q02535 119 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 PRSS8Q16651 343 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 VMA21Q3ZAQ7 101 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 MMD2Q8IY49 270 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR51H1Q8NH63 302 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 NUDT15Q9NV35 164 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR1L6Q8NGR2 347 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 NDUFA4L2Q9NRX3 87 aa8.87□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SNRNP70P08621 437 aaKnown RBP8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR5AC1P0C628 307 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 COX7A1P24310 79 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 UBA52P62987 128 aaKnown RBP8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 HMX3A6NHT5 357 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RAB25P57735 213 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SPAG16Q8N0X2 631 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 LEAP2Q969E1 77 aa8.86□□□□□ -0.99
CSGALNACT2-201ENST00000374466 EGR2P11161 476 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SRD5A1P18405 259 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 LPAR6P43657 344 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 CYCSP99999 105 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RUSC1-AS1Q66K80 236 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 C12orf45Q8N5I9 185 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 C17orf50Q8WW18 174 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SRRM4A7MD48 611 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 HLA-AP01891 365 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RLN1P04808 185 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TCTEX1D2Q8WW35 142 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 PARD6GQ9BYG4 376 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SLC25A4P12235 298 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 PRCDQ00LT1 54 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SMCO1Q147U7 214 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 AKIRIN2Q53H80 203 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SSX3Q99909 188 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 ZNF702PQ9H963 129 aa8.85□□□□□ -0.99
CSGALNACT2-201ENST00000374466 CGB1A6NKQ9 187 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 MARCH11A6NNE9 402 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 IGLV1-40P01703 118 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR4A47Q6IF82 309 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 PPP1R14BQ96C90 147 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR51J1Q9H342 316 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 MALRD1Q5VYJ5 2156 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RAMP3O60896 148 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 S1PR2O95136 353 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 VDAC2P45880 294 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SPCS3P61009 180 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TATDN3Q17R31 274 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RNASE12Q5GAN4 147 aaKnown RBP8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SGMS2Q8NHU3 365 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 DNAJC9-AS1A6NH13 148 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 IGKV1-16P04430 117 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 OR2B8PP59922 312 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 RUNX1Q01196 453 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TCTE3Q8IZS6 198 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 BCL6BQ8N143 479 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 SIGLECL1Q8N7X8 197 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 C2orf50Q96LR7 162 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 ALG5Q9Y673 324 aa8.84□□□□□ -0.99
CSGALNACT2-201ENST00000374466 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SAA1P0DJI8 122 aaPredicted RBP8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 TMEM11P17152 192 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 ANXA7P20073 488 aaKnown RBP8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 FXYD4P59646 89 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 MRPL41Q8IXM3 137 aaKnown RBP8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 FLVCR2Q9UPI3 526 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 VPS13CQ709C8 3753 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 CHST1O43916 411 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 TRIM16LQ309B1 348 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 TMEM65Q6PI78 240 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 PPP1R27Q86WC6 154 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SLC35G3Q8N808 338 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 OR1L8Q8NGR8 309 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SMIM8Q96KF7 97 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 TMEM140Q9NV12 185 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 CRYBG3Q68DQ2 2970 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 IGHV7-81A0A0B4J1V7 117 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 A0A1W2PN81 502 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SMAD7O15105 426 aaKnown RBP8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 IGKV1-33P01594 117 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 CHRNA7P36544 502 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 C4orf46Q504U0 113 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 GPR146Q96CH1 333 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SEC22CQ9BRL7 303 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 SLC25A33Q9BSK2 321 aa8.83□□□□□ -1
CSGALNACT2-201ENST00000374466 BEX2Q9BXY8 128 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms