RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 LINC00473A8K010 186 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 CDS2O95674 445 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 IGKV1-39P01597 117 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 IGKV1D-39P04432 117 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 CTXN2P0C2S0 81 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 CCL3L1P16619 93 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 TLE4Q04727 773 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF343Q6P1L6 599 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF266Q14584 549 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 GALNT14Q96FL9 552 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 GAL3ST2Q9H3Q3 398 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 CYB561D1Q8N8Q1 229 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF709Q8N972 641 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
CXCL12-203ENST00000374429 TRBV6-7A0A0A0MS04 114 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 OR4A8P0C604 315 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 CEACAM1P13688 526 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 P2RY1P47900 373 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 PTTG1IPP53801 180 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 UBE2KP61086 200 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 LY6DQ14210 128 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 ASCL4Q6XD76 172 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 GATAD1Q8WUU5 269 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 DNAJC4Q9NNZ3 241 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 SLC39A9Q9NUM3 307 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 CACFD1Q9UGQ2 172 aa9.02□□□□□ -0.96
CXCL12-203ENST00000374429 COL5A1P20908 1838 aaPredicted RBP9.02□□□□□ -0.96
CXCL12-203ENST00000374429 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 AHRRA9YTQ3 701 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 TAAR5O14804 337 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 OR2C1O95371 312 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 TAGLN2P37802 199 aaKnown RBP9.02□□□□□ -0.97
CXCL12-203ENST00000374429 SULT1A2P50226 295 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 BSPH1Q075Z2 132 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 TMEM108Q6UXF1 575 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 H1FOOQ8IZA3 346 aaPredicted RBP9.02□□□□□ -0.97
CXCL12-203ENST00000374429 ZNF664Q8N3J9 261 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 OR10A7Q8NGE5 316 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 PHYHIPLQ96FC7 376 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 RPRMQ9NS64 109 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 IL36GQ9NZH8 169 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 C20orf202A1L168 122 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 MMP23AO75900 390 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 MPZP25189 248 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 SLC38A11Q08AI6 406 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 SPACA3Q8IXA5 215 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 GCSAMQ8N6F7 178 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 LHX4Q969G2 390 aa9.02□□□□□ -0.97
CXCL12-203ENST00000374429 LIN7CQ9NUP9 197 aaKnown RBP9.02□□□□□ -0.97
CXCL12-203ENST00000374429 LOC102724200A0A096LPH7 203 aaPredicted RBP9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ODAMA1E959 279 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ITGB1BP1O14713 200 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CRYABP02511 175 aaKnown RBP9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CD24P25063 80 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CATR1Q13166 79 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 RBKSQ9H477 322 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ANAPC10Q9UM13 185 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 IGKV1D-17A0A075B6S4 117 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 TRAV38-1A0A0B4J264 116 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 PLAUP00749 431 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 TDGF1P3P51864 188 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ZNF585BQ52M93 769 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 DOLPP1Q86YN1 238 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 QTRT1Q9BXR0 403 aaKnown RBP9.01□□□□□ -0.97
CXCL12-203ENST00000374429 EGLN1Q9GZT9 426 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 TUBD1Q9UJT1 453 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
CXCL12-203ENST00000374429 COX7A1P24310 79 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 UCP1P25874 307 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CD82P27701 267 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CEACAM8P31997 349 aaPredicted RBP9.01□□□□□ -0.97
CXCL12-203ENST00000374429 SULT1A1P50225 295 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 RBX1P62877 108 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 SRPXP78539 464 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 TFF3Q07654 80 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ADIRFQ15847 76 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 C11orf53Q8IXP5 236 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
CXCL12-203ENST00000374429 A0A0G2JNJ9 132 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 IQCF6A8MYZ5 107 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 C16orf97H3BN30 126 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 TOX4O94842 621 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 SOD3P08294 240 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 BMI1P35226 326 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 GNB1P62873 340 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 LEMD1Q68G75 181 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 C11orf42Q8N5U0 333 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 PRR7Q8TB68 274 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 Q9UFV3 132 aa9□□□□□ -0.97
CXCL12-203ENST00000374429 H0Y980 276 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms