RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CD46P15529 392 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 GABRG2P18507 467 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 CX3CL1P78423 397 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 MRPL49Q13405 166 aaKnown RBP10.84□□□□□ -0.67
PRPF4-201ENST00000374198 VWC2Q2TAL6 325 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 HES4Q9HCC6 221 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-201ENST00000374198 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 ZNF16P17020 682 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-201ENST00000374198 SELENOVP59797 346 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 TBR1Q16650 682 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 COX19Q49B96 90 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 WFDC8Q8IUA0 241 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 LMX1AQ8TE12 382 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 TMEM54Q969K7 222 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 SARAFQ96BY9 339 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 PPP1R3CQ9UQK1 317 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 RP1P56715 2156 aa10.84□□□□□ -0.67
PRPF4-201ENST00000374198 SDK1Q7Z5N4 2213 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 DHHO43323 396 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 BCL3P20749 454 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 YPEL5P62699 121 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 IGFBP7Q16270 282 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 SCCPDHQ8NBX0 429 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 LINC00869P0C866 280 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
PRPF4-201ENST00000374198 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 C1orf61Q13536 156 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 MUC21Q5SSG8 566 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 EBLN2Q6P2I7 272 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 C20orf204Q6ZNR8 217 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 FGFRL1Q8N441 504 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 Q8N7P7 452 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 OR8B3Q8NGG8 313 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 OR8B2Q96RD0 313 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 LIN7CQ9NUP9 197 aaKnown RBP10.83□□□□□ -0.68
PRPF4-201ENST00000374198 KLRF1Q9NZS2 232 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 TP73-AS1Q9UF72 201 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 LY96Q9Y6Y9 160 aa10.83□□□□□ -0.68
PRPF4-201ENST00000374198 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
PRPF4-201ENST00000374198 RIF1Q5UIP0 2472 aaKnown RBP10.83□□□□□ -0.68
PRPF4-201ENST00000374198 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 M0R1X1 148 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 SYNGR3O43761 229 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 CAPZBP47756 277 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 TRIM61Q5EBN2 209 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 TCF24Q7RTU0 167 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 OR13H1Q8NG92 308 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 GPR179Q6PRD1 2367 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 IGHV5-51A0A0C4DH38 117 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 hCG_38984A0A1B0GV85 526 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 C9JCJ5 164 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 G3V4G9 280 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 CELA3BP08861 270 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 RPL31P62899 125 aaKnown RBP10.82□□□□□ -0.68
PRPF4-201ENST00000374198 PAX2Q02962 417 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 VWA1Q6PCB0 445 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 SLC22A18ASQ8N1D0 253 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
PRPF4-201ENST00000374198 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 TRAV8-6A0A0B4J262 113 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 UBE2G1P62253 170 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
PRPF4-201ENST00000374198 FAM27BQ5VT28 67 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 C12orf54Q6X4T0 127 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 OR10G3Q8NGC4 313 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 OR1F12Q8NHA8 337 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
PRPF4-201ENST00000374198 TDRD6O60522 2096 aaKnown RBP10.82□□□□□ -0.68
PRPF4-201ENST00000374198 EP300Q09472 2414 aaPredicted RBP10.81□□□□□ -0.68
PRPF4-201ENST00000374198 AMY1AP04745 511 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 EDDM3BP56851 147 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 FGF12P61328 243 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 SLC35B1P78383 322 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
PRPF4-201ENST00000374198 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 IGHV3-20A0A0C4DH32 117 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 CD5LO43866 347 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 OR7C2O60412 319 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 TNXAQ16473 311 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 ZNF718Q3SXZ3 478 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 DEFB119Q8N690 84 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 ZNF837Q96EG3 531 aaPredicted RBP10.81□□□□□ -0.68
PRPF4-201ENST00000374198 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 OR1A1Q9P1Q5 309 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 ZNF391Q9UJN7 358 aa10.81□□□□□ -0.68
PRPF4-201ENST00000374198 TRGV10A0A0A0MS01 117 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms