RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
HDAC8-201ENST00000373554 CD33P20138 364 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 TBPP20226 339 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 CD40LGP29965 261 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
HDAC8-201ENST00000373554 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 IL18Q14116 193 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 AKIRIN2Q53H80 203 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 VAX1Q5SQQ9 334 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 AADACL3Q5VUY0 350 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 PYHIN1Q6K0P9 492 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 IDO2Q6ZQW0 420 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 CMTM1Q8IZ96 169 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 SPAG16Q8N0X2 631 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 POC5Q8NA72 575 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 MINDY2Q8NBR6 621 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 OR5M8Q8NGP6 311 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 OR51H1Q8NH63 302 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 MTFP1Q9UDX5 166 aa9.4□□□□□ -0.9
HDAC8-201ENST00000373554 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 ZNF701M0R085 212 aaPredicted RBP9.39□□□□□ -0.91
HDAC8-201ENST00000373554 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
HDAC8-201ENST00000373554 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC8-201ENST00000373554 HRASP01112 189 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
HDAC8-201ENST00000373554 S100GP29377 79 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 GNRHRP30968 328 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 DGCR2P98153 550 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 TNXAQ16473 311 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 PRSS8Q16651 343 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 LPCAT3Q6P1A2 487 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 CD300LFQ8TDQ1 290 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 PHB2Q99623 299 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 AIFM2Q9BRQ8 373 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
HDAC8-201ENST00000373554 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
HDAC8-201ENST00000373554 M0QYG6 137 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 GPR31O00270 319 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 SOX15O60248 233 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 RAMP3O60896 148 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 KBTBD11O94819 623 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 OR2A4O95047 310 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 CD3DP04234 171 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 RLN1P04808 185 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 MYCNOSP40205 109 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 RAB9AP51151 201 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 BRWD1-AS2P59051 145 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 TAS2R19P59542 299 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
HDAC8-201ENST00000373554 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
HDAC8-201ENST00000373554 ETV3LQ6ZN32 361 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 C18orf65Q6ZTR6 163 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 VKORC1L1Q8N0U8 176 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 ARRDC1Q8N5I2 433 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 MYOZ3Q8TDC0 251 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 SMIM4Q8WVI0 70 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 RHOVQ96L33 236 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 NXF2Q9GZY0 626 aaKnown RBP9.38□□□□□ -0.91
HDAC8-201ENST00000373554 KLK15Q9H2R5 256 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
HDAC8-201ENST00000373554 VSIG4Q9Y279 399 aa9.38□□□□□ -0.91
HDAC8-201ENST00000373554 CTDSPLO15194 276 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 MPPED1O15442 326 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
HDAC8-201ENST00000373554 HPRT1P00492 218 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 S100A5P33763 92 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 TPPP2P59282 170 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 TAS2R31P59538 309 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 C1QL4Q86Z23 238 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 SLC38A6Q8IZM9 456 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
HDAC8-201ENST00000373554 SPIN2AQ99865 258 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 SPIN2BQ9BPZ2 258 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 TINAGL1Q9GZM7 467 aaPredicted RBP9.37□□□□□ -0.91
HDAC8-201ENST00000373554 SLA2Q9H6Q3 261 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
HDAC8-201ENST00000373554 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 G3V4G9 280 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 H3BUA1 57 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 CCL24O00175 119 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
HDAC8-201ENST00000373554 RAB3DO95716 219 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 CD74P04233 296 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 NQO2P16083 231 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 F2RP25116 425 aa9.36□□□□□ -0.91
HDAC8-201ENST00000373554 TNFSF8P32971 234 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms