RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 OR10A7Q8NGE5 316 aa11.02□□□□□ -0.65
CSTF2-201ENST00000372972 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
CSTF2-201ENST00000372972 DYNLRB1Q9NP97 96 aa11.02□□□□□ -0.65
CSTF2-201ENST00000372972 TMEM106BQ9NUM4 274 aa11.02□□□□□ -0.65
CSTF2-201ENST00000372972 NBEAQ8NFP9 2946 aa11.02□□□□□ -0.65
CSTF2-201ENST00000372972 MMP23AO75900 390 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 APOBEC3AP31941 199 aaPredicted RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 RPL31P62899 125 aaKnown RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 HAGHQ16775 308 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 SLC25A48Q6ZT89 311 aaKnown RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 VKORC1L1Q8N0U8 176 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 GAL3ST2Q9H3Q3 398 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 VSIRQ9H7M9 311 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 RAI1Q7Z5J4 1906 aaPredicted RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 CD3EP07766 207 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 GNG10P50151 68 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 RPP30P78346 268 aaKnown RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 RELBQ01201 579 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 PDLIM3Q53GG5 364 aaPredicted RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF506Q5JVG8 444 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 CLDND2Q8NHS1 167 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 CLCC1Q96S66 551 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 UNKLQ9H9P5 680 aaKnown RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 NDRG3Q9UGV2 375 aa11.01□□□□□ -0.65
CSTF2-201ENST00000372972 DIDO1Q9BTC0 2240 aaKnown RBP11.01□□□□□ -0.65
CSTF2-201ENST00000372972 C15orf62A8K5M9 175 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 TNFRSF13BO14836 293 aaPredicted RBP11□□□□□ -0.65
CSTF2-201ENST00000372972 HSPB1P04792 205 aaKnown RBP11□□□□□ -0.65
CSTF2-201ENST00000372972 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
CSTF2-201ENST00000372972 CDSNQ15517 529 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 VWC2Q2TAL6 325 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 KHDC3LQ587J8 217 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF383Q8NA42 475 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
CSTF2-201ENST00000372972 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 B9A039 149 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ICAM4Q14773 271 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 EFNB3Q15768 340 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF726P1Q15940 193 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF429Q86V71 674 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 LINC01560Q8TB33 94 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 RCC1LQ96I51 464 aaKnown RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 RHOVQ96L33 236 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 RPS10P5Q9NQ39 176 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 DSCAML1Q8TD84 2053 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 TRAV3A0A0B4J244 114 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 H7C2Y5 167 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 M0R036 132 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 NDUFB3O43676 98 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 HRASP01112 189 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ARG1P05089 322 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 DAOP14920 347 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 FGF7P21781 194 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 VDAC2P45880 294 aaPredicted RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ELLP55199 621 aaPredicted RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 RPS16P62249 146 aaKnown RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 AWAT1Q58HT5 328 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 LRRC10Q5BKY1 277 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 TMEM200BQ69YZ2 307 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF787Q6DD87 383 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 LCN15Q6UWW0 184 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 HEPN1Q6WQI6 88 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF714Q96N38 554 aa10.99□□□□□ -0.65
CSTF2-201ENST00000372972 HEYLQ9NQ87 328 aaPredicted RBP10.99□□□□□ -0.65
CSTF2-201ENST00000372972 NBASA2RRP1 2371 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
CSTF2-201ENST00000372972 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 C7orf77A4D0Y5 90 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 FCN3O75636 299 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 IFNA10P01566 189 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 MBP02144 154 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 SNRNP70P08621 437 aaKnown RBP10.98□□□□□ -0.65
CSTF2-201ENST00000372972 HFEQ30201 348 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 OR4A47Q6IF82 309 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 LYPD2Q6UXB3 125 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 ETV3LQ6ZN32 361 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 RXFP4Q8TDU9 374 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 GNG13Q9P2W3 67 aa10.98□□□□□ -0.65
CSTF2-201ENST00000372972 LOC102723971A0A1B0GUV8 181 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 CT45A6P0DMU7 189 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 CT45A5P0DMU8 189 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 CT45A7P0DMV0 189 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 MDKP21741 143 aaPredicted RBP10.97□□□□□ -0.65
CSTF2-201ENST00000372972 ERVFRD-1P60508 538 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 POU2AF1Q16633 256 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 SSX7Q7RTT5 188 aa10.97□□□□□ -0.65
CSTF2-201ENST00000372972 RPP25LQ8N5L8 163 aaKnown RBP10.97□□□□□ -0.65
CSTF2-201ENST00000372972 CA5BP1Q8WTZ4 195 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms