RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 PSMG3Q9BT73 122 aaPredicted RBP10.05□□□□□ -0.8
PTPN1-201ENST00000371621 FGF21Q9NSA1 209 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 RRHO14718 337 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 KLF7O75840 302 aaPredicted RBP10.05□□□□□ -0.8
PTPN1-201ENST00000371621 TMEM50AO95807 157 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 GPR12P47775 334 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 PLXNB2O15031 1838 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 PLGLB1Q02325 96 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 COX19Q49B96 90 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 WFDC3Q8IUB2 231 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PLXDC1Q8IUK5 500 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 GALMQ96C23 342 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
PTPN1-201ENST00000371621 MED13LQ71F56 2210 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 MS4A18H0YCH9 400 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 ID3Q02535 119 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 MS4A18Q3C1V0 323 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 SH2D2AQ9NP31 389 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 LOC105371242A0A075B767 164 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 H0Y980 276 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PLAUP00749 431 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 AMY1AP04745 511 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PPIAL4GP0DN37 164 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 RAB9AP51151 201 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 FLYWCH2Q96CP2 140 aaKnown RBP10.04□□□□□ -0.8
PTPN1-201ENST00000371621 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 CELA2BP08218 269 aaPredicted RBP10.04□□□□□ -0.8
PTPN1-201ENST00000371621 AZU1P20160 251 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 UCP1P25874 307 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 GNB1P62873 340 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 FHL1Q13642 323 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 TNXAQ16473 311 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 SLC35E4Q6ICL7 350 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 OR2V2Q96R30 315 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
PTPN1-201ENST00000371621 SEPSECSQ9HD40 501 aaKnown RBP10.04□□□□□ -0.8
PTPN1-201ENST00000371621 P04436 131 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 IGLL1P15814 213 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 LMO1P25800 156 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 RBM11P57052 281 aaKnown RBP10.03□□□□□ -0.8
PTPN1-201ENST00000371621 RHBDD1Q8TEB9 315 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 LOC285556D6RIA3 1793 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 RPL36A-HNRNPH2H7BZ11 118 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 PNKDQ8N490 385 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 OR10G3Q8NGC4 313 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 PGLYRP4Q96LB8 373 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 OR51B2Q9Y5P1 312 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 IGHV2-70DA0A0C4DH43 119 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 J3QW42 95 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 K7EP13 123 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 TNFSF11O14788 317 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 NGFP01138 241 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 CGAP01215 116 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 CISD3P0C7P0 127 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 SELENOVP59797 346 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 TPRX1Q8N7U7 411 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 CTHRC1Q96CG8 243 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 CHRNA10Q9GZZ6 450 aa10.03□□□□□ -0.8
PTPN1-201ENST00000371621 LIPT2A6NK58 231 aa10.02□□□□□ -0.8
PTPN1-201ENST00000371621 COX7A2P2O60397 106 aa10.02□□□□□ -0.8
PTPN1-201ENST00000371621 TIMP3P35625 211 aa10.02□□□□□ -0.8
PTPN1-201ENST00000371621 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.8
PTPN1-201ENST00000371621 OR1L4Q8NGR5 311 aa10.02□□□□□ -0.8
PTPN1-201ENST00000371621 SPACA9Q96E40 222 aaPredicted RBP10.02□□□□□ -0.8
PTPN1-201ENST00000371621 A1L4Q6 167 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
PTPN1-201ENST00000371621 CXCL13O43927 109 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 STAG3L3P0CL85 134 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 NBASA2RRP1 2371 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 TGFAP01135 160 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 HBZP02008 142 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 COL8A1P27658 744 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
PTPN1-201ENST00000371621 ABHD12Q8N2K0 398 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 OR10D3Q8NH80 312 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF501Q96CX3 271 aaPredicted RBP10.02□□□□□ -0.81
PTPN1-201ENST00000371621 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
PTPN1-201ENST00000371621 A0A1W2PS18 150 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 MT-CO3P00414 261 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 PRB4P10163 310 aaPredicted RBP10.01□□□□□ -0.81
PTPN1-201ENST00000371621 OR5P3Q8WZ94 311 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 LRRC61Q9BV99 259 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 DUSP15Q9H1R2 295 aaPredicted RBP10.01□□□□□ -0.81
PTPN1-201ENST00000371621 PKDREJQ9NTG1 2253 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 TET1Q8NFU7 2136 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms