RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 MOB4Q9Y3A3 225 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 TDRD15B5MCY1 1934 aaKnown RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 KLF4O43474 513 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 SYNGR3O43761 229 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 RELQ04864 619 aaPredicted RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 ZNF729A6NN14 1252 aaPredicted RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 CFDP00746 253 aaPredicted RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 IGHMP01871 453 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 ZNRF1Q8ND25 227 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 ARFGEF1Q9Y6D6 1849 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 RECKO95980 971 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 COX6CP09669 75 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 SRIP30626 198 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 RPS11P62280 158 aaKnown RBP eCLIP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 CD200R1LQ6Q8B3 271 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 DRAM1Q8N682 238 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 DNASE2BQ8WZ79 361 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 NPIPB3Q92617 1050 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 ABLIM2Q6H8Q1 611 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 TIMP4Q99727 224 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 F11RQ9Y624 299 aaKnown RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.62
TM9SF3-201ENST00000371142 IGHV3OR16-13A0A075B7E8 117 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 IGHV3-74A0A0B4J1X5 117 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 COX5BP10606 129 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 LGALS3P17931 250 aaKnown RBP18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 ZNF56Q15929 161 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 RPL39P5Q59GN2 51 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 CENPVQ7Z7K6 275 aaPredicted RBP18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 FBLIM1Q8WUP2 373 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 TMEM186Q96B77 213 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 CTHRC1Q96CG8 243 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 LIPFP07098 398 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 SCGB1A1P11684 91 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 AGAP20933 346 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 WFIKKN1Q96NZ8 548 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 SPSB4Q96A44 273 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 GALNT14Q96FL9 552 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 PARLQ9H300 379 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 RALYQ9UKM9 306 aaKnown RBP18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 PDLIM4P50479 330 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 GOLT1AQ6ZVE7 132 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 OR5P3Q8WZ94 311 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 EEF1AKMT3Q96AZ1 226 aa18.89■□□□□ 0.61
TM9SF3-201ENST00000371142 NPIPB11E5RHQ5 1161 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 SMAD7O15105 426 aaKnown RBP18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 GFRA3O60609 400 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 EGR4Q05215 589 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 ACSF3Q4G176 576 aaPredicted RBP18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 PRSS2P07478 247 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 RPS20P60866 119 aaKnown RBP18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 UNQ9370/PRO34162Q6UXP9 181 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 NABP2Q9BQ15 211 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 NPDC1Q9NQX5 325 aaPredicted RBP18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 C7orf71A4D174 169 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 FHITP49789 147 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 LINC01590Q5TEZ4 76 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 ASPHD2Q6ICH7 369 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 FADS6Q8N9I5 356 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 FDCSPQ8NFU4 85 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 SPSB2Q99619 263 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 RFPL3SP0C7P2 107 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 NPPCP23582 126 aa18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 AKIRIN1Q9H9L7 192 aaPredicted RBP18.88■□□□□ 0.61
TM9SF3-201ENST00000371142 COL4A1P02462 1669 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 ZNF98A6NK75 572 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 NUP37Q8NFH4 326 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 DNAJC13O75165 2243 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 IGHV3-66A0A0C4DH42 116 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 GAGE10A6NGK3 116 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 FAM209AQ5JX71 171 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 ZNF146Q15072 292 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 IL4P05112 153 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 S4R3C0 116 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 FOXI3A8MTJ6 420 aaPredicted RBP18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 CELA3AP09093 270 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 FABP2P12104 132 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 SMIM8Q96KF7 97 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 SIGLEC12Q96PQ1 595 aa18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 SSBP3Q9BWW4 388 aaPredicted RBP18.87■□□□□ 0.61
TM9SF3-201ENST00000371142 DPH3Q96FX2 82 aa18.86■□□□□ 0.61
TM9SF3-201ENST00000371142 DNM1P46Q6ZS02 220 aa18.86■□□□□ 0.61
TM9SF3-201ENST00000371142 RBFOX2O43251 390 aaKnown RBP eCLIP18.86■□□□□ 0.615e-8■■■□□ 18.3
TM9SF3-201ENST00000371142 RRHO14718 337 aa18.86■□□□□ 0.61
TM9SF3-201ENST00000371142 OR10S1Q8NGN2 331 aa18.86■□□□□ 0.61
TM9SF3-201ENST00000371142 RAMP1O60894 148 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 HIST1H1AQ02539 215 aaPredicted RBP18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 Q5BKY6 102 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 LINC00305Q7Z4B0 112 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 PPP1R32Q7Z5V6 425 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 OR11H4Q8NGC9 324 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 UBR3Q6ZT12 1888 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 GRIFINA4D1Z8 144 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 TMEM14DPA8MWL7 114 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 EGR1P18146 543 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 APCDD1LQ8NCL9 501 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 MEIG1Q5JSS6 88 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 IGHV3-49A0A0A0MS15 119 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 SIAH2O43255 324 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 PMCHL1Q16048 86 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms