RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SNAPC5O75971 98 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 OR2F2O95006 317 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 IGKV1-39P01597 117 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 RLN2P04090 185 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 IGKV1D-39P04432 117 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 HTR2BP41595 481 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 LPAR6P43657 344 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF134P52741 427 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 CATR1Q13166 79 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 OR2F1Q13607 317 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 EXOSC2Q13868 293 aaKnown RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF585BQ52M93 769 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 RPL39P5Q59GN2 51 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 THOC7Q6I9Y2 204 aaKnown RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF767PQ75MW2 155 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 KIR3DL3Q8N743 410 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZBTB34Q8NCN2 500 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 OR4D5Q8NGN0 318 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 EDARADDQ8WWZ3 215 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 GPR146Q96CH1 333 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 YPEL2Q96QA6 119 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 SPIN2AQ99865 258 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 CITED1Q99966 193 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 SPIN2BQ9BPZ2 258 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 MAGT1Q9H0U3 335 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 RAB9BQ9NP90 201 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 LINC00312Q9Y6C7 94 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 WNK1Q9H4A3 2382 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 TRAV40A0A0B4J280 105 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 DUXBA0A1W2PPF3 345 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 LINC00473A8K010 186 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 M0R1X1 148 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 BCL2L11O43521 198 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 RAMP3O60896 148 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 DEDDO75618 318 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 B3GALNT1O75752 331 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 SPDEFO95238 335 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 IFNA7P01567 189 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 LYL1P12980 280 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 VDAC1P21796 283 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 AKR1C2P52895 323 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
TPM3-210ENST00000368530 EIF4EBP1Q13541 118 aaPredicted RBP8.07□□□□□ -1.12
TPM3-210ENST00000368530 ZNF345Q14585 488 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 NMSQ5H8A3 153 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 BRD3OSQ6XYD6 125 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 Q6YL49 198 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 OR8H3Q8N146 312 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 PCNPQ8WW12 178 aaKnown RBP8.07□□□□□ -1.12
TPM3-210ENST00000368530 CORO2AQ92828 525 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 IL22RA2Q969J5 263 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 AGMATQ9BSE5 352 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 ABHD14AQ9BUJ0 271 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 IFI27L2Q9H2X8 130 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 GAL3ST2Q9H3Q3 398 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 C1RLQ9NZP8 487 aa8.07□□□□□ -1.12
TPM3-210ENST00000368530 ST8SIA3O43173 380 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 S1PR2O95136 353 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 IGKV1-5P01602 117 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 NKX2-1P43699 371 aaPredicted RBP8.06□□□□□ -1.12
TPM3-210ENST00000368530 POLR2GP62487 172 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPM3-210ENST00000368530 GNB2P62879 340 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 CXorf66Q5JRM2 361 aaPredicted RBP8.06□□□□□ -1.12
TPM3-210ENST00000368530 ALKAL2Q6UX46 152 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 SLC51BQ86UW2 128 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 LYG1Q8N1E2 194 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 NEIL1Q96FI4 390 aaPredicted RBP8.06□□□□□ -1.12
TPM3-210ENST00000368530 ZNF714Q96N38 554 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
TPM3-210ENST00000368530 ZNRD1Q9P1U0 126 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 MIOXQ9UGB7 285 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 UBQLN2Q9UHD9 624 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 POMT1Q9Y6A1 747 aa8.06□□□□□ -1.12
TPM3-210ENST00000368530 A0A1B0GUS0 222 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 C22orf46C9J442 243 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 E5RGE8 158 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 NDUFA2O43678 99 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 SSSCA1O60232 199 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 NDUFA7O95182 113 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 G6PCP35575 357 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 RAB7AP51149 207 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 MSMO1Q15800 293 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 WDR25Q64LD2 544 aaPredicted RBP8.05□□□□□ -1.12
TPM3-210ENST00000368530 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 ZNF66Q6ZN08 573 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 HSD17B10Q99714 261 aaKnown RBP8.05□□□□□ -1.12
TPM3-210ENST00000368530 ARPC5LQ9BPX5 153 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 SMIM3Q9BZL3 60 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 TAS2R3Q9NYW6 316 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 KAAG1Q9UBP8 84 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 CACNG5Q9UF02 275 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 RPUSD1Q9UJJ7 312 aaKnown RBP8.05□□□□□ -1.12
TPM3-210ENST00000368530 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
TPM3-210ENST00000368530 SAA2-SAA4A0A096LPE2 208 aa8.04□□□□□ -1.12
TPM3-210ENST00000368530 FCGR3BO75015 233 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms