RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 COMMD1Q8N668 190 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 YPEL2Q96QA6 119 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 PDLIM3Q53GG5 364 aaPredicted RBP11.42□□□□□ -0.58
SHC1-202ENST00000368445 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 ZNF295-AS1Q8N0V1 137 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 CYB561D1Q8N8Q1 229 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
SHC1-202ENST00000368445 MS4A5Q9H3V2 200 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 TMEM106BQ9NUM4 274 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 HCFC1P51610 2035 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 LHBP01229 141 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 MYOD1P15172 320 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
SHC1-202ENST00000368445 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 HSPB7Q9UBY9 170 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
SHC1-202ENST00000368445 LRBAP50851 2863 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 CFHR2P36980 270 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 HFEQ30201 348 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 WDR61Q9GZS3 305 aaKnown RBP11.41□□□□□ -0.58
SHC1-202ENST00000368445 IFI27L2Q9H2X8 130 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 SMCO4Q9NRQ5 59 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 SLC35D1Q9NTN3 355 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 ZFYVE26Q68DK2 2539 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 TACC2O95359 2948 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
SHC1-202ENST00000368445 E7EQL1 145 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 DLX1P56177 255 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 LOXL3P58215 753 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 TFF3Q07654 80 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 C17orf58Q2M2W7 97 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 STUMQ69YW2 141 aa11.41□□□□□ -0.58
SHC1-202ENST00000368445 LOC105371267A0A1B0GV96 52 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 FAM90A26D6RGX4 464 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 LY6HO94772 140 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
SHC1-202ENST00000368445 AVPI1Q5T686 147 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 TMEM147Q9BVK8 224 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 FAM208BQ5VWN6 2430 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 IGHV3-72A0A0B4J1Y9 119 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 ZNF788Q6ZQV5 615 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 FAM24BQ8N5W8 94 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 TMPRSS5Q9H3S3 457 aa11.4□□□□□ -0.58
SHC1-202ENST00000368445 A0A1W2PPV4 95 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 NUP37Q8NFH4 326 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 OR10G4Q8NGN3 311 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 ZNF714Q96N38 554 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 GAL3ST2Q9H3Q3 398 aa11.4□□□□□ -0.59
SHC1-202ENST00000368445 A0A1W2PPE2 198 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 SMUG1Q53HV7 270 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
SHC1-202ENST00000368445 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
SHC1-202ENST00000368445 PATZ1Q9HBE1 687 aaKnown RBP11.39□□□□□ -0.59
SHC1-202ENST00000368445 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 S100A6P06703 90 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 GATA4P43694 442 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 RPP30P78346 268 aaKnown RBP11.39□□□□□ -0.59
SHC1-202ENST00000368445 COL12A1Q99715 3063 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 DVL1O14640 695 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 UBE2G2P60604 165 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 CST9LP1Q5W188 147 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 MUC15Q8N387 334 aa11.39□□□□□ -0.59
SHC1-202ENST00000368445 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
SHC1-202ENST00000368445 ARHGAP32A7KAX9 2087 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 IGHV1-69-2A0A0G2JMI3 117 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 HRASP01112 189 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 RPL35P42766 123 aaKnown RBP11.38□□□□□ -0.59
SHC1-202ENST00000368445 UCNP55089 124 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 SPSB3Q6PJ21 355 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 C1orf229Q6ZS94 237 aaPredicted RBP11.38□□□□□ -0.59
SHC1-202ENST00000368445 COA4Q9NYJ1 87 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 TCF19Q9Y242 345 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 BTBD17A6NE02 478 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
SHC1-202ENST00000368445 F2RL2O00254 374 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 RRHO14718 337 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 APELAP0DMC3 54 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 KLRB1Q12918 225 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 TCTEX1D1Q8N7M0 179 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 OR13D1Q8NGV5 346 aa11.38□□□□□ -0.59
SHC1-202ENST00000368445 A0A1W2PPH5 198 aa11.37□□□□□ -0.59
SHC1-202ENST00000368445 H3BQ15 152 aa11.37□□□□□ -0.59
SHC1-202ENST00000368445 SCAF4O95104 1147 aaKnown RBP11.37□□□□□ -0.59
SHC1-202ENST00000368445 APOA2P02652 100 aa11.37□□□□□ -0.59
SHC1-202ENST00000368445 IGKV1-16P04430 117 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms