RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MPPED1O15442 326 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 RAB3BP20337 219 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 DTYMKP23919 212 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 RHOGP84095 191 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 CDK10Q15131 360 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 LINC00322Q6ZN03 302 aaPredicted RBP12.14□□□□□ -0.47
CKS1B-202ENST00000368436 MMD2Q8IY49 270 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
CKS1B-202ENST00000368436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
CKS1B-202ENST00000368436 CREBL2O60519 120 aaPredicted RBP12.13□□□□□ -0.47
CKS1B-202ENST00000368436 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 PRH1P02810 166 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 IFNA6P05013 189 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
CKS1B-202ENST00000368436 GALP22466 123 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 MYL9P24844 172 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
CKS1B-202ENST00000368436 NR2C2APQ86WQ0 139 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 ZNF645Q8N7E2 425 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 ATG5Q9H1Y0 275 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 OR2W1Q9Y3N9 320 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
CKS1B-202ENST00000368436 FCGR3BO75015 233 aa12.12□□□□□ -0.47
CKS1B-202ENST00000368436 IGLV2-14P01704 120 aa12.12□□□□□ -0.47
CKS1B-202ENST00000368436 CTXN2P0C2S0 81 aa12.12□□□□□ -0.47
CKS1B-202ENST00000368436 RPL30P62888 115 aaKnown RBP12.12□□□□□ -0.47
CKS1B-202ENST00000368436 LAX1Q8IWV1 398 aa12.12□□□□□ -0.47
CKS1B-202ENST00000368436 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
CKS1B-202ENST00000368436 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
CKS1B-202ENST00000368436 ZNF785A8K8V0 405 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 J3QRK9 145 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 TUSC2O75896 110 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 SLC22A5O76082 557 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 ACTL6BO94805 426 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
CKS1B-202ENST00000368436 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 KCTD12Q96CX2 325 aaKnown RBP12.11□□□□□ -0.47
CKS1B-202ENST00000368436 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 BLOC1S6Q9UL45 172 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
CKS1B-202ENST00000368436 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 NFYAP23511 347 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-202ENST00000368436 CD81P60033 236 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 EIF4EBP1Q13541 118 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-202ENST00000368436 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 C15orf32Q32M92 178 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 C22orf42Q6IC83 251 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 NEURL2Q9BR09 285 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 HIPK2Q9H2X6 1198 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 MRPS7Q9Y2R9 242 aaKnown RBP12.1□□□□□ -0.47
CKS1B-202ENST00000368436 CEPT1Q9Y6K0 416 aa12.1□□□□□ -0.47
CKS1B-202ENST00000368436 IGKV1D-13A0A0B4J2D9 117 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 OR2J3O76001 311 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 TPPPO94811 219 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 IGKV1-13P0DP09 117 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 CD36P16671 472 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 KIR2DS2P43631 304 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 BRWD1-AS2P59051 145 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 PUSL1Q8N0Z8 303 aaKnown RBP12.09□□□□□ -0.47
CKS1B-202ENST00000368436 TMEM167AQ8TBQ9 72 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
CKS1B-202ENST00000368436 VCX3BQ9H321 246 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
CKS1B-202ENST00000368436 SMIM30A4D0T7 59 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 HMX3A6NHT5 357 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 C2orf70A6NJV1 201 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 NPIPB5A8MRT5 1133 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 PPP5D1E7EU14 171 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 E7EUB6 86 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 LGALS9O00182 355 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 GGCTO75223 188 aaKnown RBP12.08□□□□□ -0.48
CKS1B-202ENST00000368436 KBTBD11O94819 623 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 IL6RP08887 468 aaPredicted RBP12.08□□□□□ -0.48
CKS1B-202ENST00000368436 CD7P09564 240 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
CKS1B-202ENST00000368436 HSPA13P48723 471 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 KLK9Q2XQG4 91 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 VKORC1L1Q8N0U8 176 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms