RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ARL14EPLP0DKL9 152 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 ZP3P21754 424 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 LHFPL5Q8TAF8 219 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 ZNF430Q9H8G1 570 aaPredicted RBP17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 PITX3O75364 302 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 CLLU1Q5K131 121 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 METRNQ9UJH8 293 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 UQCRFS1P47985 274 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 ELOBQ15370 118 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 GCSAMLQ5JQS6 135 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 UQCC3Q6UW78 93 aa17.26■□□□□ 0.35
CDC42BPB-201ENST00000361246 MARCH11A6NNE9 402 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 CTDSPLO15194 276 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 BPIFA4PQ86YQ2 179 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 SRSF12Q8WXF0 261 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 LRRC37AA6NMS7 1700 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 NRN1LQ496H8 165 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 PPP1R27Q86WC6 154 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 HSPB8Q9UJY1 196 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 CD74P04233 296 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 FAM159AQ6UWV7 190 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 ZNF818PQ6ZRF7 136 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 SELENOHQ8IZQ5 122 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 WDYHV1Q96HA8 205 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 IL19Q9UHD0 177 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 FBXL7Q9UJT9 491 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 SURF2Q15527 256 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 OPN4Q9UHM6 478 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 GZMMP51124 257 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 VN1R17PQ8TDU5 208 aa17.25■□□□□ 0.35
CDC42BPB-201ENST00000361246 PTPRFP10586 1907 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 H0Y980 276 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 SCMH1Q96GD3 660 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 IGKV1D-42A0A075B6H8 117 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 H3BQ15 152 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 LIMS1P48059 325 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 CLRN3Q8NCR9 226 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 OR5P3Q8WZ94 311 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 SPRR3Q9UBC9 169 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 GOLT1AQ6ZVE7 132 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 CTXND1A0A1B0GTU2 59 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 CIDEAO60543 219 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 CCL3L1P16619 93 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 APCDD1LQ8NCL9 501 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 J3QR89 54 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 MEIG1Q5JSS6 88 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 OR13C6PQ8NH95 151 aa17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 NEU4Q8WWR8 484 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-201ENST00000361246 TRAV40A0A0B4J280 105 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 FBLL1A6NHQ2 334 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 KBTBD11O94819 623 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 MAPK1IP1LQ8NDC0 245 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 ESPL1Q14674 2120 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 ACP7Q6ZNF0 438 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 FOXD3Q9UJU5 478 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 SMIM10L1P0DMW3 83 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 SMIM10Q96HG1 83 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 IGKV1D-43A0A0B4J1Z2 117 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 CBLN2Q8IUK8 224 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 TCTEX1D1Q8N7M0 179 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 RNASE6Q93091 150 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 MARVELD1Q9BSK0 173 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 WNK3Q9BYP7 1800 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 PINLYPA6NC86 204 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 TMEM177Q53S58 311 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 RALGAPA1Q6GYQ0 2036 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 TRBV5-3A0A0A0MS03 114 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 C1QL1O75973 258 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 LINC00305Q7Z4B0 112 aa17.23■□□□□ 0.35
CDC42BPB-201ENST00000361246 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 AP4M1O00189 453 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 LHFPL4Q7Z7J7 247 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 RAB37Q96AX2 223 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 IBA57Q5T440 356 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 SLC25A33Q9BSK2 321 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 PAM16Q9Y3D7 125 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 CD99P14209 185 aa17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 FAM3BP58499 235 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 ZNF646O15015 1829 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-201ENST00000361246 ZNF729A6NN14 1252 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 M0R381 172 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 PGA5P0DJD9 388 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 GLRXP35754 106 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 PSG9Q00887 426 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 STHQ8IWL8 128 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 DRAM1Q8N682 238 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 TMEM186Q96B77 213 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 CEACAM4O75871 244 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 SLC16A13Q7RTY0 426 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 OR51G1Q8NGK1 321 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 SH3BGRL3Q9H299 93 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 TMEM219Q86XT9 240 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 OR51M1Q9H341 326 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 CD59P13987 128 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 EGR4Q05215 589 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 SRSF7Q16629 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 TMEM191AQ9H0A3 160 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms