RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 PCGF1Q9BSM1 259 aa14.75□□□□□ -0.05
CDK11A-204ENST00000358779 FAM234AQ9H0X4 552 aa14.75□□□□□ -0.05
CDK11A-204ENST00000358779 OPN3Q9H1Y3 402 aaPredicted RBP14.75□□□□□ -0.05
CDK11A-204ENST00000358779 ZMAT5Q9UDW3 170 aaKnown RBP14.75□□□□□ -0.05
CDK11A-204ENST00000358779 DUSP13Q9UII6 198 aa14.75□□□□□ -0.05
CDK11A-204ENST00000358779 IFNA10P01566 189 aa14.75□□□□□ -0.05
CDK11A-204ENST00000358779 EDDM3BP56851 147 aa14.75□□□□□ -0.05
CDK11A-204ENST00000358779 RPP30P78346 268 aaKnown RBP14.75□□□□□ -0.05
CDK11A-204ENST00000358779 HEATR1Q9H583 2144 aaKnown RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 TRAV17A0A0B4J275 112 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 GATCO43716 136 aaKnown RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 CLEC12BQ2HXU8 276 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 RPL39P5Q59GN2 51 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 FAM90A1Q86YD7 464 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 RAB1CQ92928 201 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 TET2Q6N021 2002 aaPredicted RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 INTS1Q8N201 2190 aaKnown RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 MGST3O14880 152 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 YPEL1O60688 119 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 FAM3BP58499 235 aaPredicted RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 ERVK-16P61578 105 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 GAMTQ14353 236 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 IGFL2Q6UWQ7 119 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 BHLHA15Q7RTS1 189 aaPredicted RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 OR1P1Q8NH06 330 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 FAM216AQ8WUB2 273 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 YPEL2Q96QA6 119 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 ZNF71Q9NQZ8 489 aaPredicted RBP14.74□□□□□ -0.05
CDK11A-204ENST00000358779 PROCRQ9UNN8 238 aa14.74□□□□□ -0.05
CDK11A-204ENST00000358779 PDE6DO43924 150 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 GGCTO75223 188 aaKnown RBP14.73□□□□□ -0.05
CDK11A-204ENST00000358779 MPDU1O75352 247 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 TNFSF13O75888 250 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 CRYAAP02489 173 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 BMP5P22003 454 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 ATP5G3P48201 142 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 UBE2G2P60604 165 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 TMEM249Q2WGJ8 235 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 C1orf174Q8IYL3 243 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 VKORC1L1Q8N0U8 176 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 OR5T1Q8NG75 326 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 PPP1R35Q8TAP8 253 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 S100PBPQ96BU1 408 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 HEYLQ9NQ87 328 aaPredicted RBP14.73□□□□□ -0.05
CDK11A-204ENST00000358779 IGHV3OR15-7A0A075B7D8 119 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 A0A1W2PPV4 95 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 RBFOX2O43251 390 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDK11A-204ENST00000358779 SOX15O60248 233 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 SRP14P37108 136 aaKnown RBP14.73□□□□□ -0.05
CDK11A-204ENST00000358779 VDAC2P45880 294 aaPredicted RBP14.73□□□□□ -0.05
CDK11A-204ENST00000358779 GNB1P62873 340 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 MSMPQ1L6U9 139 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 TREML4Q6UXN2 200 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 OR2T10Q8NGZ9 312 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 OR52E5Q8NH55 327 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 IFI27L2Q9H2X8 130 aa14.73□□□□□ -0.05
CDK11A-204ENST00000358779 RRHO14718 337 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 IGHV3-13P01766 116 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 IGHV3-7P01780 117 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 OPRK1P41145 380 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 P2RY6Q15077 328 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 LRP11Q86VZ4 500 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 GCSAMQ8N6F7 178 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 TMEM170AQ8WVE7 144 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 STARD4Q96DR4 205 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 MEGF10Q96KG7 1140 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 KCNIP2Q9NS61 270 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 PRSS46E5RG02 174 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 F2RL2O00254 374 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 LOXL3P58215 753 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 RELBQ01201 579 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 CR1LQ2VPA4 569 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 CST9LP1Q5W188 147 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 PATZ1Q9HBE1 687 aaKnown RBP14.72□□□□□ -0.05
CDK11A-204ENST00000358779 SLC25A15Q9Y619 301 aa14.72□□□□□ -0.05
CDK11A-204ENST00000358779 TRAV3A0A0B4J244 114 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 XKRY2A2RUG3 117 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 CGAP01215 116 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 AMBPP02760 352 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 ZNF134P52741 427 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 DEFA6Q01524 100 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 PDLIM3Q53GG5 364 aaPredicted RBP14.71□□□□□ -0.05
CDK11A-204ENST00000358779 COA6Q5JTJ3 125 aaKnown RBP14.71□□□□□ -0.05
CDK11A-204ENST00000358779 ACTL10Q5JWF8 245 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 LINC01551Q86U37 167 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 S1PR3Q99500 378 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 MGST2Q99735 147 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 MS4A5Q9H3V2 200 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 TMEM140Q9NV12 185 aa14.71□□□□□ -0.05
CDK11A-204ENST00000358779 GFRA3O60609 400 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 TYMSP04818 313 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 WT1P19544 449 aaPredicted RBP14.71□□□□□ -0.06
CDK11A-204ENST00000358779 CHRNA7P36544 502 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 KCNIP4Q6PIL6 250 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 ZNRF1Q8ND25 227 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 GGTLC1Q9BX51 225 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 DKK4Q9UBT3 224 aa14.71□□□□□ -0.06
CDK11A-204ENST00000358779 AHRRA9YTQ3 701 aa14.7□□□□□ -0.06
CDK11A-204ENST00000358779 F6UZH7 168 aa14.7□□□□□ -0.06
CDK11A-204ENST00000358779 TMPRSS2O15393 492 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms