RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SIGLECL1Q8N7X8 197 aa8.93□□□□□ -0.98
CAPN3-205ENST00000357568 Q8N976 141 aa8.93□□□□□ -0.98
CAPN3-205ENST00000357568 RNASE8Q8TDE3 154 aaKnown RBP8.93□□□□□ -0.98
CAPN3-205ENST00000357568 QTRT1Q9BXR0 403 aaKnown RBP8.93□□□□□ -0.98
CAPN3-205ENST00000357568 PATZ1Q9HBE1 687 aaKnown RBP8.93□□□□□ -0.98
CAPN3-205ENST00000357568 PPP1R3CQ9UQK1 317 aa8.93□□□□□ -0.98
CAPN3-205ENST00000357568 PAM16Q9Y3D7 125 aa8.93□□□□□ -0.98
CAPN3-205ENST00000357568 SEC16AO15027 2179 aa8.93□□□□□ -0.98
CAPN3-205ENST00000357568 TMEM8BA6NDV4 472 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 IFNL4K9M1U5 179 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 RBFOX2O43251 390 aaKnown RBP eCLIP8.92□□□□□ -0.981e-6■■■■■ 32.4
CAPN3-205ENST00000357568 CLDN14O95500 239 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 CXorf1O96002 111 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 GPX1P07203 203 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 CCL3P10147 92 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 ZNF90Q03938 601 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 MORN2Q502X0 79 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 KIAA2026Q5HYC2 2103 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 OR5B3Q8NH48 314 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 IL36RNQ9UBH0 155 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
CAPN3-205ENST00000357568 G3V3Y1 287 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 IGHEP01854 428 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 PATE4P0C8F1 98 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 STAG3L2P0CL84 134 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 STAG3L3P0CL85 134 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 SPINK2P20155 84 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 TGFBR3Q03167 851 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-205ENST00000357568 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 VN1R17PQ8TDU5 208 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 IMMP1LQ96LU5 166 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 SFXN3Q9BWM7 321 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 SAMD10Q9BYL1 202 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 KCNS2Q9ULS6 477 aa8.92□□□□□ -0.98
CAPN3-205ENST00000357568 IGKV3D-15A0A087WSY6 115 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 A0A1B0GUS0 222 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 ODAMA1E959 279 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 J3QT63 122 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 HMGB3O15347 200 aaKnown RBP8.91□□□□□ -0.98
CAPN3-205ENST00000357568 SYNGR1O43759 233 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 NXPH2O95156 264 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 AREGP15514 252 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 ATP5G3P48201 142 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 TMPRSS3P57727 454 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
CAPN3-205ENST00000357568 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
CAPN3-205ENST00000357568 PMP22Q01453 160 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 LEMD1Q68G75 181 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 OR1L1Q8NH94 360 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 FAM216AQ8WUB2 273 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 CDC42EP3Q9UKI2 254 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 PTPRZ1P23471 2315 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-205ENST00000357568 TRGV10A0A0A0MS01 117 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 IGHV1-45A0A0A0MS14 117 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 A0A1W2PPV4 95 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 NKX6-3A6NJ46 265 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 HSPB6O14558 160 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 CDIPTO14735 213 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 ZNF253O75346 499 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 IGLC2P0DOY2 106 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 CDKN1AP38936 164 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 CDKN1BP46527 198 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 TDRG1Q3Y452 100 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 C19orf35Q6ZS72 473 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 CT55Q8WUE5 264 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 SGCZQ96LD1 299 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 RBM7Q9Y580 266 aaKnown RBP8.91□□□□□ -0.98
CAPN3-205ENST00000357568 SDK2Q58EX2 2172 aa8.91□□□□□ -0.98
CAPN3-205ENST00000357568 GRIFINA4D1Z8 144 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 ANKRD30BLA7E2S9 258 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 OR5G3P0C626 314 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 RPEL1Q2QD12 228 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 ZNF718Q3SXZ3 478 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 TCF23Q7RTU1 214 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 OR1L6Q8NGR2 347 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 FBXL7Q9UJT9 491 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 TCF21O43680 179 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 MT-CO2P00403 227 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 IGFBP7Q16270 282 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 HLA-DRB5Q30154 266 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-205ENST00000357568 LRP11Q86VZ4 500 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 PNKDQ8N490 385 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 IL1F10Q8WWZ1 152 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 CLN8Q9UBY8 286 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.98
CAPN3-205ENST00000357568 DNAH14Q0VDD8 3507 aa8.89□□□□□ -0.99
CAPN3-205ENST00000357568 A0A1W2PN81 502 aa8.89□□□□□ -0.99
CAPN3-205ENST00000357568 CBLN1P23435 193 aa8.89□□□□□ -0.99
CAPN3-205ENST00000357568 ARR3P36575 388 aa8.89□□□□□ -0.99
CAPN3-205ENST00000357568 MLF1P58340 268 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms