RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SCN7AQ01118 1682 aa9.94□□□□□ -0.82
SPTBN1-202ENST00000356805 SPSB4Q96A44 273 aa9.94□□□□□ -0.82
SPTBN1-202ENST00000356805 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
SPTBN1-202ENST00000356805 NCOR1P1Q9H4R4 102 aa9.94□□□□□ -0.82
SPTBN1-202ENST00000356805 FLRT3Q9NZU0 649 aa9.94□□□□□ -0.82
SPTBN1-202ENST00000356805 SPTA1P02549 2419 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 FAM106AQ4KMX7 169 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 INO80CQ6PI98 192 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 OR4D5Q8NGN0 318 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 C21orf140B9A014 251 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 FXYD3Q14802 87 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 ZNF645Q8N7E2 425 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 DNASE2BQ8WZ79 361 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 FAM60AQ9NP50 221 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 KLK2P20151 261 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 C1QL3Q5VWW1 255 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 ATOH7Q8N100 152 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 PSG9Q00887 426 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 USP54Q70EL1 1684 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 HTN3P15516 51 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 TCF23Q7RTU1 214 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 C1QL4Q86Z23 238 aa9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 MBD1Q9UIS9 605 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-202ENST00000356805 CEP290O15078 2479 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 C9JCJ5 164 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 GDF9O60383 454 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 ZFP36L2P47974 494 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 KIAA2026Q5HYC2 2103 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 UCP3P55916 312 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 MARS2Q96GW9 593 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 WISP3O95389 354 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 COL9A1P20849 921 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 P2RY4P51582 365 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 RELQ04864 619 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 FBXW9Q5XUX1 488 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 A0A1B0GW15 77 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 HRKO00198 91 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 LDLRAD4O15165 306 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 IL9P15248 144 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 UNQ9370/PRO34162Q6UXP9 181 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 SRIP30626 198 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 PAPPA-AS1Q5QFB9 102 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 NHSQ6T4R5 1651 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 LAMB2P55268 1798 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 PGPA6NDG6 321 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 J3QT63 122 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 ARL14EPLP0DKL9 152 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 MALP21145 153 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 LIMS1P48059 325 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 STARD6P59095 220 aa9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 MRPS18BQ9Y676 258 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-202ENST00000356805 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 RBKSQ9H477 322 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 PRDM13Q9H4Q3 707 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 LAMTOR2Q9Y2Q5 125 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 IGHV3-23P01764 117 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TYMSP04818 313 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 C19orf48Q6RUI8 117 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 FAM159AQ6UWV7 190 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 NPFFR1Q9GZQ6 430 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 IGKV3D-20A0A0C4DH25 116 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TGFAP01135 160 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 EFNB2P52799 333 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 GAB4Q2WGN9 574 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TTTY12Q9BZ98 90 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 ABCA1O95477 2261 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 MFAP4P55083 255 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 C5orf30Q96GV9 206 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 JKAMPQ9P055 326 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 PLXNA1Q9UIW2 1896 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 PATJQ8NI35 1801 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TRBV5-7A0A0A0MS05 114 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 FGF5P12034 268 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 ATP5J2P56134 94 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TMPRSS3P57727 454 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 DOCK10Q96BY6 2186 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 PAPPA2Q9BXP8 1791 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TMEM229AB2RXF0 380 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 LIFP15018 202 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 TSPOP30536 169 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 RBM11P57052 281 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 OR4D11Q8NGI4 311 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 SLC25A38Q96DW6 304 aa9.91□□□□□ -0.82
SPTBN1-202ENST00000356805 DOCK3Q8IZD9 2030 aa9.9□□□□□ -0.82
SPTBN1-202ENST00000356805 RPL8P62917 257 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-202ENST00000356805 CXorf66Q5JRM2 361 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-202ENST00000356805 SHISA5Q8N114 240 aa9.9□□□□□ -0.82
SPTBN1-202ENST00000356805 POC1AQ8NBT0 407 aa9.9□□□□□ -0.82
SPTBN1-202ENST00000356805 DLL1O00548 723 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms