RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
RXRA-201ENST00000356384 TNFSF10P50591 281 aa13.76□□□□□ -0.21
RXRA-201ENST00000356384 SLC25A47Q6Q0C1 308 aa13.76□□□□□ -0.21
RXRA-201ENST00000356384 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
RXRA-201ENST00000356384 CENPVQ7Z7K6 275 aaPredicted RBP13.76□□□□□ -0.21
RXRA-201ENST00000356384 ZNF418Q8TF45 676 aaPredicted RBP13.76□□□□□ -0.21
RXRA-201ENST00000356384 SNRPD3P62318 126 aaKnown RBP13.76□□□□□ -0.21
RXRA-201ENST00000356384 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
RXRA-201ENST00000356384 NDUFA2O43678 99 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 LCN2P80188 198 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 AQP3Q92482 292 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 NPIPB3Q92617 1050 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 EEF1AKMT3Q96AZ1 226 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A10PA6NDY2 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A18PA6NE21 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A16PA6NEW6 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A20PA6NIJ5 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A8PA6NJQ4 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A7PA6NKC0 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A22PA8MWA6 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A12PA8MX19 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A5PA8MXJ8 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A23PA8MXZ1 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 MOSP00540 346 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 NGFRP08138 427 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A15PP0C7V4 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A13PP0C7W8 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A14PP0C7W9 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A24PP0C7X0 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 KCNK17Q96T54 332 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 NABP2Q9BQ15 211 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 TCF19Q9Y242 345 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 A0A1W2PQF6 199 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 OR11H12B2RN74 326 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 FAM90A26D6RGX4 464 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 OR11H1Q8NG94 326 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 SFRP2Q96HF1 295 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 PCM1Q15154 2024 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 PAPPA-AS1Q5QFB9 102 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 C10orf128Q5T292 105 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 C18orf15Q96N68 181 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 AQP10Q96PS8 301 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 PF4P02776 101 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 LIMS1P48059 325 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 KCNS1Q96KK3 526 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 PKIBQ9C010 78 aa13.75□□□□□ -0.21
RXRA-201ENST00000356384 LNP1A1A4G5 178 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 A1L4Q6 167 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 CEACAM4O75871 244 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 CDX1P47902 265 aaPredicted RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 GLIPR1P48060 266 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 NPIPB11E5RHQ5 1161 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 RRHO14718 337 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 PNKDQ8N490 385 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 MRPL16Q9NX20 251 aaKnown RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 CTSSP25774 331 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 RPS11P62280 158 aaKnown RBP eCLIP13.74□□□□□ -0.21
RXRA-201ENST00000356384 APCDD1LQ8NCL9 501 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 OR9G1Q8NH87 305 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 NUP214P35658 2090 aaPredicted RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 EGR1P18146 543 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 ATP5J2P56134 94 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 TEX29Q8N6K0 151 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
RXRA-201ENST00000356384 JPT1Q9UK76 154 aa13.74□□□□□ -0.21
RXRA-201ENST00000356384 IGHV3-23P01764 117 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 ZNF818PQ6ZRF7 136 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 ST6GALNAC3Q8NDV1 305 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 PMCHL2Q9BQD1 86 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 IGHV3-66A0A0C4DH42 116 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 FOXA3P55318 350 aaPredicted RBP13.73□□□□□ -0.21
RXRA-201ENST00000356384 ICE1Q9Y2F5 2266 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 SCN3AQ9NY46 2000 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 C5orf66Q9H5L9 145 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 LHFPL6Q9Y693 200 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 IGLV1-36A0A0B4J1U3 117 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 C1QTNF9BB2RNN3 333 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 FTH1P19P0C7X4 201 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 CENPWQ5EE01 88 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 TMEM101Q96IK0 257 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 FHITP49789 147 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 HBBP68871 147 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 CLEC7AQ9BXN2 247 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 RNF115Q9Y4L5 304 aa13.73□□□□□ -0.21
RXRA-201ENST00000356384 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 LINC00305Q7Z4B0 112 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 SMCHD1A6NHR9 2005 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 MEF2CQ06413 473 aaPredicted RBP13.72□□□□□ -0.21
RXRA-201ENST00000356384 C1orf100Q5SVJ3 147 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms