RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 STRADBQ9C0K7 418 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM106BQ9NUM4 274 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 MRPS17Q9Y2R5 130 aaKnown RBP8.47□□□□□ -1.05
PTPRA-203ENST00000356147 GOLT1BQ9Y3E0 138 aa8.47□□□□□ -1.05
PTPRA-203ENST00000356147 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM210A6NLX4 147 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 C15orf62A8K5M9 175 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 FOXH1O75593 365 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 NEURL1O76050 574 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 CD1BP29016 333 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 TCL1AP56279 114 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 CLDN18P56856 261 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 LPAL2Q16609 132 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 TIPARPQ7Z3E1 657 aaKnown RBP8.46□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF645Q8N7E2 425 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.05
PTPRA-203ENST00000356147 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.05
PTPRA-203ENST00000356147 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 A0A1B0GWJ7 208 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 ACTL6BO94805 426 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 HAND1O96004 215 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 PSG7Q13046 419 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 DMRTA1Q5VZB9 504 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 Q6ZVH6 145 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 RBM14Q96PK6 669 aaKnown RBP8.46□□□□□ -1.06
PTPRA-203ENST00000356147 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
PTPRA-203ENST00000356147 MPC1Q9Y5U8 109 aa8.46□□□□□ -1.06
PTPRA-203ENST00000356147 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 SH2D1BO14796 132 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 DLEU1O43261 78 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 VENTXO95231 258 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 CRISP2P16562 243 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 TIMP3P35625 211 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 ALKBH2Q6NS38 261 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 TMEM105Q8N8V8 129 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 OR10G8Q8NGN5 311 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 NINJ1Q92982 152 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 FAM122AQ96E09 287 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 LOXL2Q9Y4K0 774 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 TNRC6AQ8NDV7 1962 aaKnown RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 TNCP24821 2201 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 HCFC1P51610 2035 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 K7EN84 100 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 FCN1O00602 326 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 FCGR3BO75015 233 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 LCN2P80188 198 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 FXYD3Q14802 87 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 TPTE2P1Q5T6R2 138 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 PRAMEF6Q5VXH4 476 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 OBP2BQ9NPH6 170 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 HEYLQ9NQ87 328 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 FAM90A26D6RGX4 464 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 SS18L1O75177 396 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 PMCHP20382 165 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 RPL31P62899 125 aaKnown RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 PLGLB1Q02325 96 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 ATP6V1FQ16864 119 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 PDLIM3Q53GG5 364 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 OR2M7Q8NG81 312 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 OR1L6Q8NGR2 347 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 MAFAQ8NHW3 353 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 BTF3L4Q96K17 158 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 RTL8AQ9BWD3 113 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 MS4A5Q9H3V2 200 aa8.45□□□□□ -1.06
PTPRA-203ENST00000356147 SEPSECSQ9HD40 501 aaKnown RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 MBNL3Q9NUK0 354 aaKnown RBP8.45□□□□□ -1.06
PTPRA-203ENST00000356147 RNF212BA8MTL3 300 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 NPIPB11E5RHQ5 1161 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 C17orf112F2Z3M2 114 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 MYOD1P15172 320 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 ARR3P36575 388 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 LINC00596Q86U02 117 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 GCNT2Q8N0V5 402 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 OR8I2Q8N0Y5 310 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 OR13A1Q8NGR1 328 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 TMEM45BQ96B21 275 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 VAMP8Q9BV40 100 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 PARD6GQ9BYG4 376 aaPredicted RBP8.44□□□□□ -1.06
PTPRA-203ENST00000356147 DEFB127Q9H1M4 99 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 ZNF703Q9H7S9 590 aaPredicted RBP8.44□□□□□ -1.06
PTPRA-203ENST00000356147 LPAR2Q9HBW0 351 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 PDE6DO43924 150 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 P0C879 139 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 BRS3P32247 399 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 CATR1Q13166 79 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 MMDQ15546 238 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 DCAF10Q5QP82 559 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 UTF1Q5T230 341 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 SLC25A40Q8TBP6 338 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 CT55Q8WUE5 264 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 LEAP2Q969E1 77 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 R3HDM4Q96D70 268 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 COQ2Q96H96 371 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 MGST2Q99735 147 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 FBXL7Q9UJT9 491 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms