RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 OSR1Q8TAX0 266 aaPredicted RBP12.61□□□□□ -0.39
CTSA-202ENST00000354880 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
CTSA-202ENST00000354880 RHOVQ96L33 236 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
CTSA-202ENST00000354880 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 MINOS1-NBL1R4GNA1 71 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
CTSA-202ENST00000354880 K7EPK0 472 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 SHOXO15266 292 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 TMEM177Q53S58 311 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 CXorf66Q5JRM2 361 aaPredicted RBP12.6□□□□□ -0.39
CTSA-202ENST00000354880 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
CTSA-202ENST00000354880 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
CTSA-202ENST00000354880 HILPDAQ9Y5L2 63 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 CR1P17927 2039 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 IGHV3-72A0A0B4J1Y9 119 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 A0A1W2PPI3 338 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 ARPC5O15511 151 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 DEDDO75618 318 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 LYL1P12980 280 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 ID3Q02535 119 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 POU2AF1Q16633 256 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 MIDNQ504T8 468 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 DCUN1D4Q92564 292 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 AIFM2Q9BRQ8 373 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 C7orf69Q9H7B7 122 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
CTSA-202ENST00000354880 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
CTSA-202ENST00000354880 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
CTSA-202ENST00000354880 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
CTSA-202ENST00000354880 SRRM4A7MD48 611 aaKnown RBP12.59□□□□□ -0.39
CTSA-202ENST00000354880 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
CTSA-202ENST00000354880 HSPB11Q9Y547 144 aa12.59□□□□□ -0.39
CTSA-202ENST00000354880 ITPR3Q14573 2671 aa12.58□□□□□ -0.39
CTSA-202ENST00000354880 OOSP1A8MZH6 123 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 RBMXL2O75526 392 aaKnown RBP12.58□□□□□ -0.4
CTSA-202ENST00000354880 SNAPC5O75971 98 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 NXPH3O95157 252 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 RPS16P62249 146 aaKnown RBP12.58□□□□□ -0.4
CTSA-202ENST00000354880 POLR2GP62487 172 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTSA-202ENST00000354880 SSX2Q16385 188 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 TMEM249Q2WGJ8 235 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 LGALSLQ3ZCW2 172 aaPredicted RBP12.58□□□□□ -0.4
CTSA-202ENST00000354880 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 WFDC11Q8NEX6 87 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 FOXC2Q99958 501 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 MS4A7Q9GZW8 240 aaPredicted RBP12.58□□□□□ -0.4
CTSA-202ENST00000354880 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
CTSA-202ENST00000354880 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 WRBO00258 174 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 TIMM23O14925 209 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 TGFAP01135 160 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 IGHV4-31P0DP07 118 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 MALSU1Q96EH3 234 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 PLSCR3Q9NRY6 295 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
CTSA-202ENST00000354880 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 E5RGE8 158 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 NPFFO15130 113 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 CXCL2P19875 107 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 SAA4P35542 130 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
CTSA-202ENST00000354880 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
CTSA-202ENST00000354880 OR4A16Q8NH70 328 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 C17orf50Q8WW18 174 aa12.57□□□□□ -0.4
CTSA-202ENST00000354880 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 L7N2F9 121 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 SSSCA1O60232 199 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
CTSA-202ENST00000354880 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
CTSA-202ENST00000354880 PAX6P26367 422 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 CD1BP29016 333 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 LGALS7P47929 136 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 RELBQ01201 579 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 TNFRSF9Q07011 255 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 GPR157Q5UAW9 335 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 ACOT7LQ6ZUV0 252 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 DYNAPQ8N1N2 210 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 CFHR4Q92496 578 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 BET1LQ9NYM9 111 aa12.56□□□□□ -0.4
CTSA-202ENST00000354880 HSPB7Q9UBY9 170 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms