RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 CACNA1AO00555 2505 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 DOCK9Q9BZ29 2069 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 GATCO43716 136 aaKnown RBP8.18□□□□□ -1.1
GABPA-201ENST00000354828 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
GABPA-201ENST00000354828 PLAUP00749 431 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 TFF1P04155 84 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 LINC00869P0C866 280 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
GABPA-201ENST00000354828 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 TMEM255AQ5JRV8 349 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 TMEM78Q5T7P6 136 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 TMEM133Q9H2Q1 129 aa8.18□□□□□ -1.1
GABPA-201ENST00000354828 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 MPDZO75970 2070 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 ZNF407Q9C0G0 2248 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 WISP1O95388 367 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 IGHV3-48P01763 117 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 B3GALT5-AS1P59052 145 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 SELENOTP62341 195 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 HSD17B13Q7Z5P4 300 aaPredicted RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 LINC01356Q8N9X3 169 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 C5orf17Q8NAS9 161 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 FAM216AQ8WUB2 273 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 ARPC1AQ92747 370 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 TMEM222Q9H0R3 208 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 S4R3C0 116 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 HEATR1Q9H583 2144 aaKnown RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 GAS1P54826 345 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 ASPHD2Q6ICH7 369 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 MRPL20Q9BYC9 149 aaKnown RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 IL36RNQ9UBH0 155 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 A0A0G2JK05 382 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 A0A1W2PPQ1 181 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 PQLC2LA1A4F0 135 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 TMEM14DPA8MWL7 114 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 TDGF1P13385 188 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 RAB5AP20339 215 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 NTF3P20783 257 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 EWSR1Q01844 656 aaKnown RBP eCLIP8.17□□□□□ -1.1
GABPA-201ENST00000354828 KHDC3LQ587J8 217 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 MBNL2Q5VZF2 373 aaKnown RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 PAQR4Q8N4S7 273 aaPredicted RBP8.17□□□□□ -1.1
GABPA-201ENST00000354828 PAXXQ9BUH6 204 aa8.17□□□□□ -1.1
GABPA-201ENST00000354828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.17□□□□□ -1.1
GABPA-201ENST00000354828 OR2C1O95371 312 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 BRD3OSQ6XYD6 125 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 LTBP2Q14767 1821 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 IGHV3-49A0A0A0MS15 119 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 SPINK4O60575 86 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 C12orf54Q6X4T0 127 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 OSR1Q8TAX0 266 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 TCF19Q9Y242 345 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 WNK2Q9Y3S1 2297 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 G3V3Q6 166 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 IGKV3-20P01619 116 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 ZNF735P0CB33 412 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 WT1P19544 449 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 BTN1A1Q13410 526 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 ZNF207O43670 478 aaKnown RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 SCGB1D1O95968 90 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 ACAA1P09110 424 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 WNT2P09544 360 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 WDR25Q64LD2 544 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 SLC16A13Q7RTY0 426 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 RBKSQ9H477 322 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 OTOGLQ3ZCN5 2332 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 TRAV20A0A0B4J274 112 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 E7EQL1 145 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 HLA-DQB1P01920 261 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 MGPP08493 103 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 COL8A1P27658 744 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 BPIFA4PQ86YQ2 179 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 KLHDC3Q9BQ90 382 aa8.16□□□□□ -1.1
GABPA-201ENST00000354828 ELF5Q9UKW6 265 aaPredicted RBP8.16□□□□□ -1.1
GABPA-201ENST00000354828 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 A0A1B0GTI1 187 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 IGKV3-15P01624 115 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.1
GABPA-201ENST00000354828 PEMTQ9UBM1 199 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 V9GYH0 126 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 TMSB15BA0A087X1C1 80 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 RAB19A4D1S5 217 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 TMEM178BH3BS89 294 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 NUTF2P61970 127 aaKnown RBP8.15□□□□□ -1.1
GABPA-201ENST00000354828 ZNF818PQ6ZRF7 136 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 GPR146Q96CH1 333 aa8.15□□□□□ -1.1
GABPA-201ENST00000354828 SIGLEC5O15389 551 aa8.15□□□□□ -1.11
GABPA-201ENST00000354828 NBR2O15453 112 aa8.15□□□□□ -1.11
GABPA-201ENST00000354828 VMO1Q7Z5L0 202 aa8.15□□□□□ -1.11
GABPA-201ENST00000354828 FAM103A1Q9BTL3 118 aaKnown RBP8.15□□□□□ -1.11
GABPA-201ENST00000354828 NDUFS8O00217 210 aa8.15□□□□□ -1.11
GABPA-201ENST00000354828 COL8A2P25067 703 aa8.15□□□□□ -1.11
GABPA-201ENST00000354828 ADIPOQQ15848 244 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms