RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 BMPR1BO00238 502 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 MPPED1O15442 326 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 SAA1P0DJI8 122 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 DTYMKP23919 212 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 EXOSC2Q13868 293 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 CDK10Q15131 360 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 NR2C2APQ86WQ0 139 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 TUBA4BQ9H853 241 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 PEMTQ9UBM1 199 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 J3QRK9 145 aa10.96□□□□□ -0.65
PRPF40A-201ENST00000354363 ATP5G2Q06055 141 aa10.96□□□□□ -0.65
PRPF40A-201ENST00000354363 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
PRPF40A-201ENST00000354363 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
PRPF40A-201ENST00000354363 ATG5Q9H1Y0 275 aa10.96□□□□□ -0.65
PRPF40A-201ENST00000354363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 AIREO43918 545 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 FCGR3BO75015 233 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 ACTL6BO94805 426 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 CDNFQ49AH0 187 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 C10orf55Q5SWW7 151 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 MMD2Q8IY49 270 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 HLA-DQB1P01920 261 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 IFNA6P05013 189 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 NFYAP23511 347 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 RPL30P62888 115 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 ARL6IP1Q15041 203 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 C22orf42Q6IC83 251 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 CNBD2Q96M20 576 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 DCUN1D5Q9BTE7 237 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 ST6GALNAC5Q9BVH7 336 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 BLOC1S6Q9UL45 172 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 RBMX2Q9Y388 322 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
PRPF40A-201ENST00000354363 IGKV1D-13A0A0B4J2D9 117 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 SMIM30A4D0T7 59 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 TUSC2O75896 110 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 IGLV2-14P01704 120 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 IGKV1-13P0DP09 117 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 GALP22466 123 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 OR2B11Q5JQS5 317 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 HACD4Q5VWC8 232 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 IZUMO2Q6UXV1 221 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 LINC00322Q6ZN03 302 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 PLEKHA3Q9HB20 300 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 PRELID3BQ9Y3B1 194 aa10.94□□□□□ -0.66
PRPF40A-201ENST00000354363 HMX3A6NHT5 357 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 ZNF785A8K8V0 405 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 OR2J3O76001 311 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 CTXN2P0C2S0 81 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 CD36P16671 472 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 CD81P60033 236 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 NUDCD2Q8WVJ2 157 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 OR51E2Q9H255 320 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 DCSTAMPQ9H295 470 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 VCX3BQ9H321 246 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 RETNQ9HD89 108 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 MRPS7Q9Y2R9 242 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 DMRT1Q9Y5R6 373 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 CEPT1Q9Y6K0 416 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
PRPF40A-201ENST00000354363 TEX22C9J3V5 150 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 PPP5D1E7EU14 171 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 SLC22A5O76082 557 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 HSPA13P48723 471 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 EIF4EBP1Q13541 118 aaPredicted RBP10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 C15orf32Q32M92 178 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 CNIH2Q6PI25 160 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 SLC25A42Q86VD7 318 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 LAX1Q8IWV1 398 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 KCTD12Q96CX2 325 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 NEURL2Q9BR09 285 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 HIPK2Q9H2X6 1198 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-201ENST00000354363 TMEM235A6NFC5 223 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 NOTOA8MTQ0 251 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 E7EUB6 86 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 KBTBD11O94819 623 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 IL6RP08887 468 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 CD7P09564 240 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 EDN2P20800 178 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 DEFB114Q30KQ6 69 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 FAM209BQ5JX69 171 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 C19orf35Q6ZS72 473 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 PUSL1Q8N0Z8 303 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 OR4S2Q8NH73 311 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 TCTEX1D2Q8WW35 142 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 HSD17B10Q99714 261 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 A0A1B0GW64 132 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms