RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 Q8TCH9 128 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 DERL1Q9BUN8 251 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 CELSR3Q9NYQ7 3312 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 BMP5P22003 454 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 GPR12P47775 334 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 EDDM3BP56851 147 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 ZNF664Q8N3J9 261 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 NOL4LQ96MY1 436 aaPredicted RBP20.36■□□□□ 0.85
CPNE1-202ENST00000352393 IMMP2LQ96T52 175 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 A0A1B0GV90 55 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 A8MWP6 167 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 PRSS46E5RG02 174 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 HPRT1P00492 218 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 OPRK1P41145 380 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 SPCS3P61009 180 aa20.36■□□□□ 0.85
CPNE1-202ENST00000352393 FCGR3BO75015 233 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 NDUFB4O95168 129 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 PRAMEF5Q5TYX0 476 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 CST9LP1Q5W188 147 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 TREML4Q6UXN2 200 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 TMPRSS7Q7RTY8 843 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 TMEM18Q96B42 140 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 MSL2Q9HCI7 577 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 FRYQ5TBA9 3013 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 COL6A3P12111 3177 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 VDAC2P45880 294 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-202ENST00000352393 CNN1P51911 297 aaKnown RBP20.35■□□□□ 0.85
CPNE1-202ENST00000352393 PDLIM3Q53GG5 364 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-202ENST00000352393 ZNF114Q8NC26 417 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 FZR1Q9UM11 496 aa20.35■□□□□ 0.85
CPNE1-202ENST00000352393 A0A1W2PPV4 95 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 C1QTNF9P0C862 333 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 HOXC12P31275 282 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 SSTP61278 116 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 RPP30P78346 268 aaKnown RBP20.34■□□□□ 0.85
CPNE1-202ENST00000352393 TRIP6Q15654 476 aaKnown RBP20.34■□□□□ 0.85
CPNE1-202ENST00000352393 OR52E5Q8NH55 327 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 BTF3L4Q96K17 158 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 TRIB1Q96RU8 372 aa20.34■□□□□ 0.85
CPNE1-202ENST00000352393 TET2Q6N021 2002 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-202ENST00000352393 CECR9P0C854 216 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 TMPRSS3P57727 454 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 EDDM3AQ14507 147 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 LTC4SQ16873 150 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 FAM90A1Q86YD7 464 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 C1orf162Q8NEQ5 155 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-202ENST00000352393 FAM216AQ8WUB2 273 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 LRRC29Q8WV35 223 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 MGST2Q99735 147 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 PATZ1Q9HBE1 687 aaKnown RBP20.33■□□□□ 0.85
CPNE1-202ENST00000352393 TUBG2Q9NRH3 451 aa20.33■□□□□ 0.85
CPNE1-202ENST00000352393 AURKAIP1Q9NWT8 199 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-202ENST00000352393 A0A1B0GWJ7 208 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 RRHO14718 337 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 IGHG3P01860 377 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 CCKARP32238 428 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 FOXL1Q12952 345 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 GBGT1Q8N5D6 347 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 TXNDC17Q9BRA2 123 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 GGTLC1Q9BX51 225 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 JPT1Q9UK76 154 aa20.33■□□□□ 0.84
CPNE1-202ENST00000352393 RBFOX2O43251 390 aaKnown RBP eCLIP20.32■□□□□ 0.847e-8■■■■□ 26.3
CPNE1-202ENST00000352393 STAG3L2P0CL84 134 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 STAG3L3P0CL85 134 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 ARL14EPLP0DKL9 152 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 CNEP1R1Q8N9A8 125 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 OR4A16Q8NH70 328 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 MS4A5Q9H3V2 200 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 TRBV20OR9-2A0A075B6H5 130 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 SLC31A2O15432 143 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 PRDX2P32119 198 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 TNFSF10P50591 281 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 FABP6P51161 128 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 MORN2Q502X0 79 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 NDUFAF3Q9BU61 184 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 PXMP4Q9Y6I8 212 aa20.32■□□□□ 0.84
CPNE1-202ENST00000352393 PGPEP1LA6NFU8 196 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 GFRA3O60609 400 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 DHRS13Q6UX07 377 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 SFRP2Q96HF1 295 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 C2orf88Q9BSF0 95 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 HEYLQ9NQ87 328 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-202ENST00000352393 GNG12Q9UBI6 72 aa20.31■□□□□ 0.84
CPNE1-202ENST00000352393 A0A0U1RQK1 487 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 ZNF320A2RRD8 509 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 ZNF705GA8MUZ8 300 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-202ENST00000352393 M0R1X1 148 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 KIR2DL2P43627 348 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-202ENST00000352393 RELBQ01201 579 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 SSX2Q16385 188 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 ZNF718Q3SXZ3 478 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 LBHQ53QV2 105 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-202ENST00000352393 MBNL2Q5VZF2 373 aaKnown RBP20.3■□□□□ 0.84
CPNE1-202ENST00000352393 VWA1Q6PCB0 445 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 KNTC1P50748 2209 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 MIC13Q5XKP0 118 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 CHODLQ9H9P2 273 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 ELOVL5Q9NYP7 299 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 TRAPPC1Q9Y5R8 145 aa20.3■□□□□ 0.84
CPNE1-202ENST00000352393 IGKV1D-17A0A075B6S4 117 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms