RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 C2orf68Q2NKX9 166 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 TIGITQ495A1 244 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 PAQR4Q8N4S7 273 aaPredicted RBP10.31□□□□□ -0.76
SMAD9-201ENST00000350148 H2BFSP57053 126 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 H1FOOQ8IZA3 346 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-201ENST00000350148 FGFBP3Q8TAT2 258 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 HARBI1Q96MB7 349 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 NRIP2Q9BQI9 281 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 SMDT1Q9H4I9 107 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 C17orf100A8MU93 164 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 NPY1RP25929 384 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 SLC25A15Q9Y619 301 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 MPDU1O75352 247 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 WDR31Q8NA23 367 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 OR9G1Q8NH87 305 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 PARP11Q9NR21 331 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 CRISP2P16562 243 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 WNT5AP41221 380 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 NUP37Q8NFH4 326 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 UQCR10Q9UDW1 63 aa10.3□□□□□ -0.76
SMAD9-201ENST00000350148 ISLRO14498 428 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 GNG7O60262 68 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 CDX1P47902 265 aaPredicted RBP10.29□□□□□ -0.76
SMAD9-201ENST00000350148 ST6GALNAC3Q8NDV1 305 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 SPRY4Q9C004 299 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 DOCK9Q9BZ29 2069 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 CLEC2AQ6UVW9 174 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 IGFL2Q6UWQ7 119 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 ASCL4Q6XD76 172 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
SMAD9-201ENST00000350148 TRAV39A0A0B4J263 110 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 FCN1O00602 326 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 CELA3BP08861 270 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 HLA-GP17693 338 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 SERF2P84101 59 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 MRPL30Q8TCC3 161 aaKnown RBP10.29□□□□□ -0.76
SMAD9-201ENST00000350148 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
SMAD9-201ENST00000350148 DIRC3C9JPN6 131 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 RCC1P18754 421 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-201ENST00000350148 G6PCP35575 357 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 ERVS71-1P61550 626 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 COLCA1Q6ZS62 124 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM241Q24JQ0 296 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 RTN4RL2Q86UN3 420 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 NCBP2LA6PVI3 153 aaKnown RBP10.28□□□□□ -0.76
SMAD9-201ENST00000350148 OPRK1P41145 380 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 UBE2G1P62253 170 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 PAX5Q02548 391 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 RELQ04864 619 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-201ENST00000350148 TCF15Q12870 199 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 NIT1Q86X76 327 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 OR5AL1P0C617 328 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 UCP1P25874 307 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 PDLIM4P50479 330 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 TRBV6-6A0A0A6YYG2 114 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 CORTO00230 105 aa10.28□□□□□ -0.76
SMAD9-201ENST00000350148 PNRC1Q12796 327 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-201ENST00000350148 SNRNP40Q96DI7 357 aaKnown RBP10.28□□□□□ -0.76
SMAD9-201ENST00000350148 LIPFP07098 398 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 GLIPR1P48060 266 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 GAMTQ14353 236 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 ACY3Q96HD9 319 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 PIMREGQ9BSJ6 248 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.76
SMAD9-201ENST00000350148 SRSF3P84103 164 aaKnown RBP10.27□□□□□ -0.77
SMAD9-201ENST00000350148 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 SMIM8Q96KF7 97 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 TLNRD1Q9H1K6 362 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 OR51B2Q9Y5P1 312 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF205O95201 554 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 PSMB2P49721 201 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF146Q15072 292 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 TNXAQ16473 311 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 SPATA45Q537H7 98 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF497Q6ZNH5 498 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 MMD2Q8IY49 270 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 DMRTA2Q96SC8 542 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF256Q9Y2P7 627 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-201ENST00000350148 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 MPTX1A8MV57 137 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 B4DEV8 164 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 CEACAM4O75871 244 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 LGALS7P47929 136 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 Q6ZS49 121 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms