RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LCN2P80188 198 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ONECUT1Q9UBC0 465 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ARHGEF17Q96PE2 2063 aaPredicted RBP12.48□□□□□ -0.41
NUP50-201ENST00000347635 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
NUP50-201ENST00000347635 TAS2R60P59551 318 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 VSTM2AQ8TAG5 236 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ORM2P19652 201 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 FAM216AQ8WUB2 273 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 VPS25Q9BRG1 176 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
NUP50-201ENST00000347635 ODAMA1E959 279 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 WISP1O95388 367 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 TFF3Q07654 80 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 OR8I2Q8N0Y5 310 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 FA2HQ7L5A8 372 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 FAM57AQ8TBR7 257 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 C9JQL5 133 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
NUP50-201ENST00000347635 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 OR1B1Q8NGR6 318 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
NUP50-201ENST00000347635 RPEQ96AT9 228 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 TOX4O94842 621 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 SLC35E4Q6ICL7 350 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 ABHD17AQ96GS6 310 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 HIF1ANQ9NWT6 349 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 COL4A3Q01955 1670 aa12.47□□□□□ -0.41
NUP50-201ENST00000347635 RPL23P62829 140 aaKnown RBP12.46□□□□□ -0.41
NUP50-201ENST00000347635 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
NUP50-201ENST00000347635 UBTD1Q9HAC8 227 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 TMEM140Q9NV12 185 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 ZNF716A6NP11 495 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 EGR1P18146 543 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 KLF14Q8TD94 323 aaPredicted RBP12.46□□□□□ -0.41
NUP50-201ENST00000347635 WBP1Q96G27 269 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 RNF24Q9Y225 148 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 OR5I1Q13606 314 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.41
NUP50-201ENST00000347635 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.42
NUP50-201ENST00000347635 GTF3AQ92664 365 aaKnown RBP12.46□□□□□ -0.42
NUP50-201ENST00000347635 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.42
NUP50-201ENST00000347635 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 RBP4P02753 201 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 SLC35B1P78383 322 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 ZNF324BQ6AW86 544 aaPredicted RBP12.45□□□□□ -0.42
NUP50-201ENST00000347635 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 OR4B1Q8NGF8 309 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 CELA3AP09093 270 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 COX6B1P14854 86 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 TIMM23BQ5SRD1 257 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 C1orf147Q96MC9 270 aaPredicted RBP12.45□□□□□ -0.42
NUP50-201ENST00000347635 ELOVL1Q9BW60 279 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 HTR1DP28221 377 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 MPV17P39210 176 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
NUP50-201ENST00000347635 HARBI1Q96MB7 349 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 RFNGQ9Y644 331 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 SSTR5P35346 364 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 MBD3L1Q8WWY6 194 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 WDYHV1Q96HA8 205 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 HIST1H1EP10412 219 aaKnown RBP12.45□□□□□ -0.42
NUP50-201ENST00000347635 BMPERQ8N8U9 685 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 ZNF581Q9P0T4 197 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 JPT1Q9UK76 154 aa12.45□□□□□ -0.42
NUP50-201ENST00000347635 PPIAL4EA0A075B759 164 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 E9PLN8 166 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 PPIAL4DF5H284 164 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 PPIAL4FP0DN26 164 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 PPIAL4AQ9Y536 164 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 TRAV1-1A0A0B4J248 108 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 PLPPR1Q8TBJ4 325 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 ZNF596Q8TC21 504 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 WIPF3A6NGB9 483 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 ISLRO14498 428 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 P01737 135 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 TMEM170AQ8WVE7 144 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 TRAV24A0A0B4J272 114 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 ERVFRD-1P60508 538 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms