RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 DRAM1Q8N682 238 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 WDR31Q8NA23 367 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 DTD1Q8TEA8 209 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 RDH5Q92781 318 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 OR1A1Q9P1Q5 309 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
HMGA1-202ENST00000347617 ANKRD30BLA7E2S9 258 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 NUPR1O60356 82 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 TIMP3P35625 211 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 WNT5AP41221 380 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 RNFT1Q5M7Z0 435 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 ZNF497Q6ZNH5 498 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 CPEB3Q8NE35 698 aaKnown RBP13.28□□□□□ -0.28
HMGA1-202ENST00000347617 IL1F10Q8WWZ1 152 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 HSPB9Q9BQS6 159 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 PATZ1Q9HBE1 687 aaKnown RBP13.28□□□□□ -0.28
HMGA1-202ENST00000347617 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 SLC45A2Q9UMX9 530 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
HMGA1-202ENST00000347617 TRAV39A0A0B4J263 110 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 A0A1W2PPV4 95 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.28
HMGA1-202ENST00000347617 SYNGR1O43759 233 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 NDUFB4O95168 129 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 RPP30P78346 268 aaKnown RBP13.27□□□□□ -0.28
HMGA1-202ENST00000347617 PMP22Q01453 160 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 WDR73Q6P4I2 378 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 ZADH2Q8N4Q0 377 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 WFIKKN1Q96NZ8 548 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 MRPL18Q9H0U6 180 aaKnown RBP13.27□□□□□ -0.28
HMGA1-202ENST00000347617 MBNL3Q9NUK0 354 aaKnown RBP13.27□□□□□ -0.28
HMGA1-202ENST00000347617 GVINP1Q7Z2Y8 2422 aa13.27□□□□□ -0.28
HMGA1-202ENST00000347617 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 C9JCJ5 164 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 J3QT63 122 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 CLDN14O95500 239 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 RAB7AP51149 207 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 ZNF90Q03938 601 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 TFF3Q07654 80 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 OR5I1Q13606 314 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 FBXW9Q5XUX1 488 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 Q6P435 159 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 BAGE3Q86Y29 109 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 PRR18Q8N4B5 295 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 SIGLECL1Q8N7X8 197 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 OR5T1Q8NG75 326 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 SLC35E1Q96K37 410 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 TAAR6Q96RI8 345 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
HMGA1-202ENST00000347617 GNB1LQ9BYB4 327 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 SAMD10Q9BYL1 202 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 UQCR10Q9UDW1 63 aa13.27□□□□□ -0.29
HMGA1-202ENST00000347617 A6NNC1 897 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 AQP7O14520 342 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 WDR1O75083 606 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 SERF1AO75920 110 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 CXorf1O96002 111 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 C1QTNF9P0C862 333 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 CD1BP29016 333 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 ARR3P36575 388 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 MCEMP1Q8IX19 187 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 SPRR3Q9UBC9 169 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
HMGA1-202ENST00000347617 ODAMA1E959 279 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 SIAH2O43255 324 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 MT-CO2P00403 227 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 RAC2P15153 192 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 OPRK1P41145 380 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 TGFBR3Q03167 851 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 KLHDC1Q8N7A1 406 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 APH1AQ96BI3 265 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 ARL2-SNX15V9GYD0 113 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 FAM90A9PA6NNJ1 464 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 CHRNB4P30926 498 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 ATP5G3P48201 142 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 IGFBP7Q16270 282 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 C1orf174Q8IYL3 243 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 VN1R17PQ8TDU5 208 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 C11orf52Q96A22 123 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 GAL3ST2Q9H3Q3 398 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 CLN8Q9UBY8 286 aa13.25□□□□□ -0.29
HMGA1-202ENST00000347617 WISP2O76076 250 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 STAG3L2P0CL84 134 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 STAG3L3P0CL85 134 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 SELEP16581 610 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 LGALS4P56470 323 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 LINC00310P59036 64 aa13.24□□□□□ -0.29
HMGA1-202ENST00000347617 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
HMGA1-202ENST00000347617 ARF1P84077 181 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms