RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SLC35E4Q6ICL7 350 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 IGFL2Q6UWQ7 119 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 C1QL4Q86Z23 238 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 LFNGQ8NES3 379 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 NPCDR1Q9BY65 106 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 OPA3Q9H6K4 179 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TRAV20A0A0B4J274 112 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM30CPA0ZSE6 113 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 MARCH11A6NNE9 402 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 IL2RGP31785 369 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 PRDX2P32119 198 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 DUTP33316 252 aaKnown RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ATP5G3P48201 142 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TLE4Q04727 773 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 C17orf58Q2M2W7 97 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 MORN2Q502X0 79 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM41BQ5BJD5 291 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 SPATA31B1PQ5VZV4 182 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 SLC25A24Q6NUK1 477 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 DTD1Q8TEA8 209 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 S100PBPQ96BU1 408 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 RPUSD4Q96CM3 377 aaKnown RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 WFIKKN1Q96NZ8 548 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 PATZ1Q9HBE1 687 aaKnown RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 POLDIP2Q9Y2S7 368 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 SLC25A15Q9Y619 301 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ACACAQ13085 2346 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 OOEPA6NGQ2 149 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FCGR3BO75015 233 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FOXH1O75593 365 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 DLX1P56177 255 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 RPL23P62829 140 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 P2RY6Q15077 328 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 RUSC1-AS1Q66K80 236 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 INO80CQ6PI98 192 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CENPVQ7Z7K6 275 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 RAB24Q969Q5 203 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 TOLLIPQ9H0E2 274 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 IFI27L2Q9H2X8 130 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 LIN7CQ9NUP9 197 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 A0A087WWC5 75 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 IFNA5P01569 189 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 KITLGP21583 273 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FGF7P21781 194 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 UBE2G2P60604 165 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 HTD2P86397 168 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 C16orf82Q7Z2V1 217 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 MOGAT3Q86VF5 341 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR5T1Q8NG75 326 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF251Q9BRH9 671 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 NIPSNAP3BQ9BS92 247 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 SRRM4A7MD48 611 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 E7EUB6 86 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 SPRY3O43610 288 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PAGE4O60829 102 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CYB5R3P00387 301 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PFN1P07737 140 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CGB3P0DN86 165 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CGB7P0DN87 165 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CD82P27701 267 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 EIF2S3P41091 472 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PRB3Q04118 309 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CT45A1Q5HYN5 189 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 C9orf152Q5JTZ5 239 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FAM209BQ5JX69 171 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 FFAR4Q5NUL3 377 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 SLC35E3Q7Z769 313 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM178AQ8NBL3 297 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR10G4Q8NGN3 311 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR10G9Q8NGN4 311 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR10G7Q8NGN6 311 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CT45A3Q8NHU0 189 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 SCGB1C1Q8TD33 95 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 NANOS1Q8WY41 292 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 LHX4Q969G2 390 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR2V2Q96R30 315 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PSMG3Q9BT73 122 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 CXXC4Q9H2H0 198 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PARLQ9H300 379 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 PRDM13Q9H4Q3 707 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 OR6C3Q9NZP0 311 aa4.98□□□□□ -1.61
CLCN3-201ENST00000347613 TLN1Q9Y490 2541 aaKnown RBP4.98□□□□□ -1.61
CLCN3-201ENST00000347613 AQP7O14520 342 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 NUPR1O60356 82 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 DFFBO76075 338 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 LY86O95711 162 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 LHBP01229 141 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 LGALS4P56470 323 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 GNB1P62873 340 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 DIAPH2-AS1Q14236 149 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 OR4X1Q8NH49 305 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 SNX22Q96L94 193 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 M0R1B8 84 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 RBFOX2O43251 390 aaKnown RBP eCLIP4.97□□□□□ -1.611e-9■■■■■ 33.1
CLCN3-201ENST00000347613 CLDN14O95500 239 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 IGKV1-16P04430 117 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 CDX1P47902 265 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms