RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PALMDQ9NP74 551 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 DNHD1Q96M86 4753 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 FBXO24O75426 580 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 CA2P00918 260 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 PI3P19957 117 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 UBE2KP61086 200 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 SLC35B1P78383 322 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 TRIQKQ629K1 86 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 IDO2Q6ZQW0 420 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 VKORC1L1Q8N0U8 176 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 MARCH1Q8TCQ1 289 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 GON7Q9BXV9 100 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 SLC2A9Q9NRM0 540 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 SCP2D1Q9UJQ7 156 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 ATP6V0E1O15342 81 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 CNIH1O95406 144 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 HRASP01112 189 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 CD28P10747 220 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 VDAC1P21796 283 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 ECI1P42126 302 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 GNB1P62873 340 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 CX3CL1P78423 397 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 HIST2H2BDQ6DRA6 164 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 C10orf99Q6UWK7 81 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 TBC1D26Q86UD7 250 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 TEX45Q8NA69 505 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 OR4X2Q8NGF9 303 aa16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 ZNF486Q96H40 463 aaPredicted RBP16.41■□□□□ 0.22
SMARCB1-202ENST00000344921 RBFOX2O43251 390 aaKnown RBP eCLIP16.4■□□□□ 0.222e-7■■■■■ 33.6
SMARCB1-202ENST00000344921 HPRT1P00492 218 aa16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 F2RP25116 425 aa16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 KLF9Q13886 244 aaPredicted RBP16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 SSX9Q7RTT3 188 aa16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 AIFM2Q9BRQ8 373 aa16.4■□□□□ 0.22
SMARCB1-202ENST00000344921 PIGPP57054 158 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 PJVKQ0ZLH3 352 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 BAK1Q16611 211 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 ZNF562Q6V9R5 426 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 Q6ZNX1 250 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 OR13C8Q8NGS7 320 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 RHOVQ96L33 236 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 HRASLSQ9HDD0 168 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 COPZ2Q9P299 210 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 WSB1Q9Y6I7 421 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 IGF1P05019 195 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 CRYGBP07316 175 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 FXYD3Q14802 87 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 VSTM2AQ8TAG5 236 aa16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 WIPF2Q8TF74 440 aaPredicted RBP16.39■□□□□ 0.21
SMARCB1-202ENST00000344921 ANK2Q01484 3957 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 PLXNB1O43157 2135 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 ACTL6BO94805 426 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 NDPQ00604 133 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 ECSCRQ19T08 205 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 TCTEX1D1Q8N7M0 179 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 CCDC71LQ8N9Z2 235 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 FAM103A1Q9BTL3 118 aaKnown RBP16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 PLEKHA2Q9HB19 425 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 SLC2A8Q9NY64 477 aa16.38■□□□□ 0.21
SMARCB1-202ENST00000344921 MPPED1O15442 326 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 CREBL2O60519 120 aaPredicted RBP16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 OR2A4O95047 310 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 S1PR2O95136 353 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 NQO2P16083 231 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 LPAR6P43657 344 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 TAS2R31P59538 309 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 TNXAQ16473 311 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 KHDC1LQ5JSQ8 128 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 LINC00299Q6ZSB3 139 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 DMBX1Q8NFW5 382 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 GRPEL2Q8TAA5 225 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 ARPC1AQ92747 370 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 MRGPRFQ96AM1 343 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 OR2A7Q96R45 310 aa16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 CITED2Q99967 270 aaPredicted RBP16.37■□□□□ 0.21
SMARCB1-202ENST00000344921 TRAV41A0A0B4J266 112 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 G3V318 75 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 CTSDP07339 412 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 RND3P61587 244 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 TMEM267Q0VDI3 215 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 SURF2Q15527 256 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 TEX38Q6PEX7 206 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 DEDD2Q8WXF8 326 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 SDHCQ99643 169 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 FBXO7Q9Y3I1 522 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 TET2Q6N021 2002 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 LINC00854A0A1B0GVQ3 168 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 TCRBV4S1A1TA0A5B7 111 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 RPA2P15927 270 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 ERVK-16P61578 105 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 PRSS8Q16651 343 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 NSUN5P1Q3KNT7 163 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 MMD2Q8IY49 270 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 S100ZQ8WXG8 99 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 R3HDM4Q96D70 268 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 SCGB3A2Q96PL1 93 aa16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 ZNF430Q9H8G1 570 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-202ENST00000344921 AKIP1Q9NQ31 210 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms