RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 NPCDR1Q9BY65 106 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 OR51M1Q9H341 326 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 SLC17A3O00476 420 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 FCGR2BP31994 310 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 STPG3Q8N7X2 389 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 SNRNP40Q96DI7 357 aaKnown RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 FAM131CQ96AQ9 280 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 WISP1O95388 367 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 ZNF841Q6ZN19 808 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 GATAD1Q8WUU5 269 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 PLSCR2Q9NRY7 297 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 IGKV1-27A0A075B6S5 117 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 IGLV3-32A0A0A0MS00 114 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 IGHV2OR16-5A0A0B4J2B6 119 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 KLF7O75840 302 aaPredicted RBP7.31□□□□□ -1.24
FGD6-201ENST00000343958 HINT1P49773 126 aaPredicted RBP7.31□□□□□ -1.24
FGD6-201ENST00000343958 PAFAH1B2P68402 229 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 COL4A6Q14031 1691 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 ISLRO14498 428 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 IGHV3-35A0A0C4DH35 117 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 PLAURQ03405 335 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 DOLPP1Q86YN1 238 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 CGAP01215 116 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 AMY1AP04745 511 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 SPRR3Q9UBC9 169 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 MC5RP33032 325 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 ZFP36L1Q07352 338 aaKnown RBP7.31□□□□□ -1.24
FGD6-201ENST00000343958 Q0VFX4 171 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 UNQ5815/PRO19632Q6UWF5 114 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 RPL30P62888 115 aaKnown RBP7.31□□□□□ -1.24
FGD6-201ENST00000343958 STXBP6Q8NFX7 210 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 CLDND2Q8NHS1 167 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 C1RLQ9NZP8 487 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 COL11A1P12107 1806 aaPredicted RBP7.31□□□□□ -1.24
FGD6-201ENST00000343958 WDR90Q96KV7 1748 aa7.31□□□□□ -1.24
FGD6-201ENST00000343958 TRAV24A0A0B4J272 114 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 LOXL3P58215 753 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 MMD2Q8IY49 270 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 RBM14Q96PK6 669 aaKnown RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 DNAJC4Q9NNZ3 241 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 IGHV1-69-2A0A0G2JMI3 117 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 FGF16O43320 207 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 CD55P08174 381 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 PRB4P10163 310 aaPredicted RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 C1orf174Q8IYL3 243 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 SPSB4Q96A44 273 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 FBLN5Q9UBX5 448 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 SHROOM3Q8TF72 1996 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 TRBV6-7A0A0A0MS04 114 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 F8VVB4 439 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 F8VWA3 439 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 LDLRAD4O15165 306 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 SRIP30626 198 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 HOXA4Q00056 320 aaPredicted RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 TMEM56-RWDD3S4R434 201 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 C17orf82Q86X59 251 aaPredicted RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 CD40P25942 277 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 TWIST1Q15672 202 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 CYP2G1PQ6ZSU1 146 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 MRPL20Q9BYC9 149 aaKnown RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 IQCF6A8MYZ5 107 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 ZNF146Q15072 292 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 OR9G1Q8NH87 305 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 SCNM1Q9BWG6 230 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 A0A1B0GV90 55 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 HGFACQ04756 655 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 ICAM4Q14773 271 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 PSMG3Q9BT73 122 aaPredicted RBP7.3□□□□□ -1.24
FGD6-201ENST00000343958 SDF2L1Q9HCN8 221 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 ATOH7Q8N100 152 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
FGD6-201ENST00000343958 A0A0G2JMZ2 1700 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 LRRC37A2A6NM11 1700 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 RPL7P18124 248 aaKnown RBP7.29□□□□□ -1.24
FGD6-201ENST00000343958 IFI27L2Q9H2X8 130 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 PNRC2Q9NPJ4 139 aaKnown RBP7.29□□□□□ -1.24
FGD6-201ENST00000343958 CORTO00230 105 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 TCF21O43680 179 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 SCGB1C2P0DMR2 95 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 CCL3L1P16619 93 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 UQCRFS1P47985 274 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 LY6EQ16553 131 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 ZCCHC24Q8N2G6 241 aaKnown RBP7.29□□□□□ -1.24
FGD6-201ENST00000343958 C19orf35Q6ZS72 473 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 SRSF12Q8WXF0 261 aaKnown RBP7.29□□□□□ -1.24
FGD6-201ENST00000343958 GGACTQ9BVM4 153 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 PRR19A6NJB7 356 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 NTN3O00634 580 aaPredicted RBP7.29□□□□□ -1.24
FGD6-201ENST00000343958 CBLN4Q9NTU7 201 aa7.29□□□□□ -1.24
FGD6-201ENST00000343958 CBLN1P23435 193 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms