RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 A6NDN8 102 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 M0R2Z0 102 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 ANGPTL7O43827 346 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 MPDU1O75352 247 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 CLDN1O95832 211 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 CXorf1O96002 111 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 NAPSAO96009 420 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 SRFP11831 508 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 PLA2G2AP14555 144 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 SPINK2P20155 84 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 IL11P20809 199 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 SRIP30626 198 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 LGALS7P47929 136 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 FUT6P51993 359 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 ARF1P84077 181 aaKnown RBP6.86□□□□□ -1.31
ATG4A-201ENST00000343524 VWC2Q2TAL6 325 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 LILRA6Q6PI73 481 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM136Q6ZRR5 245 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 OR2M3Q8NG83 312 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 OR1B1Q8NGR6 318 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM70Q9BUB7 260 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 COMMD5Q9GZQ3 224 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 MS4A6AQ9H2W1 248 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 CCL28Q9NRJ3 127 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM38BQ9NVV0 291 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 COPS7AQ9UBW8 275 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 HS3ST3A1Q9Y663 406 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 H0YIG0 161 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 J3QR89 54 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 M0R135 149 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 HMGB3O15347 200 aaKnown RBP6.86□□□□□ -1.31
ATG4A-201ENST00000343524 SPRY1O43609 319 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-201ENST00000343524 DKK1O94907 266 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 NTF3P20783 257 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 CRYBB3P26998 211 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 ATP5G3P48201 142 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 CLDN17P56750 224 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 MLF1P58340 268 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 MFAP5Q13361 173 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 PIGYQ3MUY2 71 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 Q56UQ5 140 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 PRR22Q8IZ63 422 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 RDH5Q92781 318 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF799Q96GE5 643 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 KLHDC3Q9BQ90 382 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 EMC6Q9BV81 110 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM191AQ9H0A3 160 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 HRASLS2Q9NWW9 162 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 ATP23Q9Y6H3 246 aa6.86□□□□□ -1.31
ATG4A-201ENST00000343524 DOCK9Q9BZ29 2069 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 PCNX3Q9H6A9 2034 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 LOC102724200A0A096LPH7 203 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-201ENST00000343524 MUC21A0A0G2JKD1 596 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 MUC21A0A140T8X8 626 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 K7EP34 96 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-201ENST00000343524 EML2O95834 649 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 HAND1O96004 215 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 CRYAAP02489 173 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 APCSP02743 223 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 IGKV3-11P04433 115 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 PSG2P11465 335 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 GPM6AP51674 278 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 PMP22Q01453 160 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 MYBPHQ13203 477 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 KLF5Q13887 457 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-201ENST00000343524 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 NEGR1Q7Z3B1 354 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 OR8I2Q8N0Y5 310 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 WIPF2Q8TF74 440 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-201ENST00000343524 RCHY1Q96PM5 261 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 OSTCQ9NRP0 149 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
ATG4A-201ENST00000343524 PHF3Q92576 2039 aaKnown RBP6.85□□□□□ -1.31
ATG4A-201ENST00000343524 C7orf71A4D174 169 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 F5H5K5 113 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 BMPR1BO00238 502 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 SAP30O75446 220 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 OR7C1O76099 320 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 CGAP01215 116 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 C17orf67Q0P5P2 114 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 TRIP6Q15654 476 aaKnown RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 LPAL2Q16609 132 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 TCTEX1D4Q5JR98 221 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF776Q68DI1 518 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 LINC00596Q86U02 117 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 SHISA5Q8N114 240 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF501Q96CX3 271 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms