RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 C9orf172C9J069 976 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 NRASP01111 189 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 HRASP01112 189 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 KRASP01116 189 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 C1QTNF9P0C862 333 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GALR1P47211 349 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PARM1Q6UWI2 310 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GLIPR2Q9H4G4 154 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CTAG2O75638 210 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 THBS2P35442 1172 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GAS1P54826 345 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SRSF1Q07955 248 aaKnown RBP eCLIP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR2V1Q8NHB1 315 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PPP1R1CQ8WVI7 109 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ABHD6Q9BV23 337 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 WISP1O95388 367 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 TRACP01848 142 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PTGER4P35408 488 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PCBD1P61457 104 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 UBE2L3P68036 154 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PTCRAQ6ISU1 281 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR1N2Q8NGR9 330 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PLEKHJ1Q9NW61 149 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR51B2Q9Y5P1 312 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 H3BQ15 152 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SOCS1O15524 211 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 NUPR1O60356 82 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 FPR2P25090 351 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 MST1P26927 711 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CXorf66Q5JRM2 361 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 METRNLQ641Q3 311 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LYZL2Q7Z4W2 148 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 B9D1Q9UPM9 204 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 KLHDC2Q9Y2U9 406 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LRRC30A6NM36 301 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SHISA9B4DS77 424 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 HERVK_113P61574 105 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 C9orf153Q5TBE3 101 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 RNF208Q9H0X6 261 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PPP1R17O96001 155 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ALOX5APP20292 161 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 FGF11Q92914 225 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 MOB4Q9Y3A3 225 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 F8P00451 2351 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 IGKV3D-15A0A087WSY6 115 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 IGKV3-15P01624 115 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF728P0DKX0 622 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CLLU1OSQ5K130 101 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 FAM201AQ5SY85 155 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SPRYD7Q5W111 196 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ADAMTSL4Q6UY14 1074 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 STAC2Q6ZMT1 411 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE5Q13069 117 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE6Q13070 117 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF506Q5JVG8 444 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 WBP1Q96G27 269 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF479Q96JC4 524 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GP1BBP13224 206 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PSG6Q00889 435 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 FAM53BQ14153 422 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PRRT2Q7Z6L0 340 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LRRC61Q9BV99 259 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CISD1Q9NZ45 108 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PSG11Q9UQ72 335 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PQ45 241 aaPredicted RBP3.05□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PQY0 241 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GHRHP01286 108 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 SLC25A34Q6PIV7 304 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 VEGFBP49765 207 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 HLA-DRB3P79483 266 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 SFXN3Q9BWM7 321 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 PBX4Q9BYU1 374 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 K7EQS6 105 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 RTP5Q14D33 572 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GPBAR1Q8TDU6 330 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 USP9YO00507 2555 aaPredicted RBP3.05□□□□□ -1.92
SYNE1-201ENST00000341594 ZBTB42B2RXF5 422 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 CRXO43186 299 aaPredicted RBP3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GZMBP10144 247 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 CYB561P49447 251 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF141Q15928 474 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 KLK15Q9H2R5 256 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GNB4Q9HAV0 340 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 FUT9Q9Y231 359 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GNG5P63218 68 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 FXYD3Q14802 87 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 DGAT2L6Q6ZPD8 337 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 ST8SIA1Q92185 356 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 RNF166Q96A37 237 aaPredicted RBP3.05□□□□□ -1.92
SYNE1-201ENST00000341594 WDR61Q9GZS3 305 aaKnown RBP3.05□□□□□ -1.92
SYNE1-201ENST00000341594 H0Y8X5 98 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 TNFRSF10CO14798 259 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 GDF1P27539 372 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 SSTR5P35346 364 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 LINC00114Q6XXX2 140 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 ERGIC1Q969X5 290 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 A0A087WUU8 490 aa3.05□□□□□ -1.92
SYNE1-201ENST00000341594 IFITM1P13164 125 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms