RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.48
TDP2-201ENST00000341060 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
TDP2-201ENST00000341060 PARLQ9H300 379 aa12.08□□□□□ -0.48
TDP2-201ENST00000341060 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
TDP2-201ENST00000341060 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
TDP2-201ENST00000341060 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 PHOX2AO14813 284 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.48
TDP2-201ENST00000341060 TRGC1P0CF51 173 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 S100A2P29034 98 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 LOXL3P58215 753 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 ABHD5Q8WTS1 349 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 FRZBQ92765 325 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 CEP295Q9C0D2 2601 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 F2RL2O00254 374 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 CEACAM4O75871 244 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 CD1BP29016 333 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
TDP2-201ENST00000341060 SPCS3P61009 180 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 RPL23P62829 140 aaKnown RBP12.07□□□□□ -0.48
TDP2-201ENST00000341060 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
TDP2-201ENST00000341060 PDLIM3Q53GG5 364 aaPredicted RBP12.07□□□□□ -0.48
TDP2-201ENST00000341060 PRAMEF5Q5TYX0 476 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 OR4F5Q8NH21 305 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 Q8TCH9 128 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 GATAD1Q8WUU5 269 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 PLPPR2Q96GM1 343 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
TDP2-201ENST00000341060 BOD1L1Q8NFC6 3051 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 PPP1R2P9O14990 202 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 SOX15O60248 233 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 TLE1Q04724 770 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 DEFB109BQ30KR1 87 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 ZNRF1Q8ND25 227 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 RAB1CQ92928 201 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 OR2V2Q96R30 315 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 SPTBN4Q9H254 2564 aa12.06□□□□□ -0.48
TDP2-201ENST00000341060 M0R1X1 148 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 SOD3P08294 240 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 DEFA4P12838 97 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 ZNF134P52741 427 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
TDP2-201ENST00000341060 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 IGF2-ASQ6U949 168 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 HIST3H2BBQ8N257 126 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 S100PBPQ96BU1 408 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 PAGE4O60829 102 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 MPDU1O75352 247 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 PFN1P07737 140 aaKnown RBP12.05□□□□□ -0.48
TDP2-201ENST00000341060 ZNF83P51522 516 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 RPL39P5Q59GN2 51 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 TIMM23BQ5SRD1 257 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 SSX9Q7RTT3 188 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 OR10A7Q8NGE5 316 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
TDP2-201ENST00000341060 MGAQ8IWI9 3026 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 LHBP01229 141 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 EDDM3BP56851 147 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
TDP2-201ENST00000341060 ERVK-16P61578 105 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 SPRNQ5BIV9 151 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 NEIL1Q96FI4 390 aaPredicted RBP12.04□□□□□ -0.48
TDP2-201ENST00000341060 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 M0R1B8 84 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 VENTXO95231 258 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 IFNA10P01566 189 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 CRYAAP02489 173 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 GLRXP35754 106 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
TDP2-201ENST00000341060 TMPRSS3P57727 454 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 RELBQ01201 579 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 ZADH2Q8N4Q0 377 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 DDB2Q92466 427 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 S1PR3Q99500 378 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 FAM234AQ9H0X4 552 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 NCOR1P1Q9H4R4 102 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 CALYQ9NYX4 217 aa12.04□□□□□ -0.48
TDP2-201ENST00000341060 C11orf94C9JXX5 98 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 CGB3P0DN86 165 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 CGB7P0DN87 165 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms