RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 MPV17P39210 176 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
RRP1B-201ENST00000340648 OR8A1Q8NGG7 326 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 AMY1AP04745 511 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 LINC00869P0C866 280 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 GCHFRP30047 84 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 TCF19Q9Y242 345 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
RRP1B-201ENST00000340648 ZCCHC14Q8WYQ9 949 aaKnown RBP12.59□□□□□ -0.39
RRP1B-201ENST00000340648 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 C1QTNF9BB2RNN3 333 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 WNT9BO14905 357 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 NUBP1P53384 320 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 BPIFA4PQ86YQ2 179 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 C1QL4Q86Z23 238 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 OR5R1Q8NH85 324 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 ZNF785A8K8V0 405 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 C17orf98A8MV24 154 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 STARD6P59095 220 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
RRP1B-201ENST00000340648 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
RRP1B-201ENST00000340648 SCO2A0A1W2PP80 73 aa12.58□□□□□ -0.39
RRP1B-201ENST00000340648 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.39
RRP1B-201ENST00000340648 CENPWQ5EE01 88 aa12.58□□□□□ -0.39
RRP1B-201ENST00000340648 TCF23Q7RTU1 214 aa12.58□□□□□ -0.39
RRP1B-201ENST00000340648 TMEM45BQ96B21 275 aa12.58□□□□□ -0.39
RRP1B-201ENST00000340648 ASCL3Q9NQ33 180 aa12.58□□□□□ -0.39
RRP1B-201ENST00000340648 GDF9O60383 454 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 SAP25Q8TEE9 199 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 CD55P08174 381 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 JOSD1Q15040 202 aaPredicted RBP12.58□□□□□ -0.4
RRP1B-201ENST00000340648 PMCHL1Q16048 86 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 C1QTNF5Q9BXJ0 243 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 ONECUT1Q9UBC0 465 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 RRHO14718 337 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 CTSSP25774 331 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 RIGQ13278 110 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 GATAD1Q8WUU5 269 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 SGK494Q96LW2 274 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 FOXJ2Q9P0K8 574 aa12.58□□□□□ -0.4
RRP1B-201ENST00000340648 TMSB15BA0A087X1C1 80 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 CEACAM18A8MTB9 384 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 C21orf140B9A014 251 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 OR51G1Q8NGK1 321 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
RRP1B-201ENST00000340648 WNT10AQ9GZT5 417 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
RRP1B-201ENST00000340648 LYL1P12980 280 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
RRP1B-201ENST00000340648 ZNF581Q9P0T4 197 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 TCF20Q9UGU0 1960 aaKnown RBP12.57□□□□□ -0.4
RRP1B-201ENST00000340648 RALGAPA1Q6GYQ0 2036 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 HSPE1P61604 102 aaKnown RBP12.57□□□□□ -0.4
RRP1B-201ENST00000340648 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 PRSS1P07477 247 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 C1orf210Q8IVY1 113 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 CCL13Q99616 98 aa12.57□□□□□ -0.4
RRP1B-201ENST00000340648 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 C5orf24Q7Z6I8 188 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 DNASE2BQ8WZ79 361 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 ABCA7Q8IZY2 2146 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 CELA3AP09093 270 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 NABP2Q9BQ15 211 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 AMBPP02760 352 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
RRP1B-201ENST00000340648 CSRP2Q16527 193 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 PMS2CLQ68D20 193 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 VOPP1Q96AW1 172 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 PGPEP1LA6NFU8 196 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 A8MWL6 223 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 B4E171 279 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 TSPAN7P41732 249 aa12.56□□□□□ -0.4
RRP1B-201ENST00000340648 TBL2Q9Y4P3 447 aaKnown RBP12.56□□□□□ -0.4
RRP1B-201ENST00000340648 CORTO00230 105 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 ACP1P24666 158 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 TMEM171Q8WVE6 324 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 PARD6GQ9BYG4 376 aaPredicted RBP12.55□□□□□ -0.4
RRP1B-201ENST00000340648 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 IL36BQ9NZH7 164 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 PTPRZ1P23471 2315 aaPredicted RBP12.55□□□□□ -0.4
RRP1B-201ENST00000340648 RPL39P5Q59GN2 51 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
RRP1B-201ENST00000340648 CGAP01215 116 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms