RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 MFSD4AQ8N468 514 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 OR5T1Q8NG75 326 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 GIMAP1Q8WWP7 306 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 ACOT12Q8WYK0 555 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 CMTM3Q96MX0 182 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 SLA2Q9H6Q3 261 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF355PQ9NSJ1 428 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 ANAPC10Q9UM13 185 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 SMIM31A0A1B0GVY4 71 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 HPGDSO60760 199 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 TRGV3P03979 118 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 APELAP0DMC3 54 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 ELK1P19419 428 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 RFX2P48378 723 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 MSMO1Q15800 293 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 TNXAQ16473 311 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 POC5Q8NA72 575 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 PHB2Q99623 299 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 SLC5A7Q9GZV3 580 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
ERCC1-203ENST00000340192 EHFQ9NZC4 300 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 TNCP24821 2201 aa11.31□□□□□ -0.6
ERCC1-203ENST00000340192 MSGN1A6NI15 193 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 K7EIL1 84 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 PMP2P02689 132 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 NAT1P18440 290 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 ALDH3B2P48448 385 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 GPR141Q7Z602 305 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 ZBTB34Q8NCN2 500 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 SRSF12Q8WXF0 261 aaKnown RBP11.3□□□□□ -0.6
ERCC1-203ENST00000340192 TMEM68Q96MH6 324 aa11.3□□□□□ -0.6
ERCC1-203ENST00000340192 IGHV4OR15-8A0A075B7B6 117 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 A0A087WW49 117 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 LINC01619G3V211 115 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 H3BUA1 57 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 SULT1C2O00338 296 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 CREBL2O60519 120 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-203ENST00000340192 RAMP3O60896 148 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 TAS2R46P59540 309 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 HERV-K104P61576 105 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 DYRK1AQ13627 763 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 C9orf66Q5T8R8 295 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 MZT2AQ6P582 158 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 DHRS11Q6UWP2 260 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 LYSMD2Q8IV50 215 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 OR5H2Q8NGV7 314 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 AP3S1Q92572 193 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 RHOVQ96L33 236 aa11.29□□□□□ -0.6
ERCC1-203ENST00000340192 C13orf42A0A1B0GVH6 325 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 ACTL6BO94805 426 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 KBTBD11O94819 623 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 OR2A4O95047 310 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF182P17025 639 aaPredicted RBP11.28□□□□□ -0.6
ERCC1-203ENST00000340192 HLA-DMAP28067 261 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 HRH1P35367 487 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 SLURP1P55000 103 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 SPAG16Q8N0X2 631 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 PUSL1Q8N0Z8 303 aaKnown RBP11.28□□□□□ -0.6
ERCC1-203ENST00000340192 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 DCUN1D4Q92564 292 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF2Q9BSG1 426 aaPredicted RBP11.28□□□□□ -0.6
ERCC1-203ENST00000340192 TINAGL1Q9GZM7 467 aaPredicted RBP11.28□□□□□ -0.6
ERCC1-203ENST00000340192 SCPEP1Q9HB40 452 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
ERCC1-203ENST00000340192 A0A0G2JLM5 398 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 OVOL1O14753 267 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 MPPED1O15442 326 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 BRI3O95415 125 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 HRASP01112 189 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
ERCC1-203ENST00000340192 GNRHRP30968 328 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 DGCR2P98153 550 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 DEFA5Q01523 94 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 CATR1Q13166 79 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
ERCC1-203ENST00000340192 OR51H1Q8NH63 302 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 DLX4Q92988 240 aaPredicted RBP11.27□□□□□ -0.61
ERCC1-203ENST00000340192 MOB3AQ96BX8 217 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 SPIN2AQ99865 258 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 SPIN2BQ9BPZ2 258 aa11.27□□□□□ -0.61
ERCC1-203ENST00000340192 ZMAT5Q9UDW3 170 aaKnown RBP11.27□□□□□ -0.61
ERCC1-203ENST00000340192 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
ERCC1-203ENST00000340192 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms