RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 Q71RC1 249 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 LYPD1Q8N2G4 141 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR52B4Q8NGK2 314 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CHCHD1Q96BP2 118 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SEC22AQ96IW7 307 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C20orf24Q9BUV8 137 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SLIRPQ9GZT3 109 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 NTMQ9P121 344 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 FBLN5Q9UBX5 448 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 PRRC2AP48634 2157 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 PLPP1O14494 284 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TMPRSS11DO60235 418 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TCF15Q12870 199 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ALKBH6Q3KRA9 238 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF260Q3ZCT1 412 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C19orf54Q5BKX5 351 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C10orf111Q8N326 155 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CELF2-AS1Q8N7Q2 184 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OSR1Q8TAX0 266 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 RNF5Q99942 180 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C1QTNF4Q9BXJ3 329 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 MRPL15Q9P015 296 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CD8AP01732 235 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 VSIG10L2P0DP72 767 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CCL4P13236 92 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ROM1Q03395 351 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 FZD5Q13467 585 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR8I2Q8N0Y5 310 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR1N2Q8NGR9 330 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 WNT2BQ93097 391 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SLC50A1Q9BRV3 221 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 A0A1W2PNV4 684 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM202A6NGA9 273 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 EPPINO95925 133 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 AMBPP02760 352 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 MPGP29372 298 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ASCL4Q6XD76 172 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ADAD2Q8NCV1 583 aaKnown RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 OR5C1Q8NGR4 320 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 OR1F12Q8NHA8 337 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 SPSB4Q96A44 273 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ATP6V0BQ99437 205 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TIMP4Q99727 224 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 NPIPB9F8W1W9 429 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF737O75373 536 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 NSUN5P1Q3KNT7 163 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 SGMS2Q8NHU3 365 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 RDH5Q92781 318 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 PLSCR2Q9NRY7 297 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 HSPB7Q9UBY9 170 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 IGLV3-16A0A075B6K0 115 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM235A6NFC5 223 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 C9JVG2 144 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 CELA3BP08861 270 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF735P0CB33 412 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 RCC1P18754 421 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 GFERP55789 205 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 B2MP61769 119 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 FBLN7Q53RD9 439 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 SPANXN5Q5MJ07 72 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 CYP2G1PQ6ZSU1 146 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 LDLRAD3Q86YD5 345 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF775Q96BV0 537 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ASCL2Q99929 193 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 CLDN16Q9Y5I7 305 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TCRBV7S3A2A0A539 114 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 UCP1P25874 307 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 CD1BP29016 333 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF141Q15928 474 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 BCL6BQ8N143 479 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 FLYWCH2Q96CP2 140 aaKnown RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TRAV1-1A0A0B4J248 108 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 IFITM10A6NMD0 228 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 PHLDA2Q53GA4 152 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 LINC00518Q8N0U6 118 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM101Q96IK0 257 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 HDHD3Q9BSH5 251 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-202ENST00000339701 WDR13Q9H1Z4 485 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 SRD5A3Q9H8P0 318 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 INSIG2Q9Y5U4 225 aa2.84□□□□□ -1.95
CSMD3-202ENST00000339701 AGPAT2O15120 278 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 MRPL3P09001 348 aaKnown RBP2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SRSF6Q13247 344 aaKnown RBP2.84□□□□□ -1.96
CSMD3-202ENST00000339701 HIKESHIQ53FT3 197 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 IGF2-ASQ6U949 168 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM91Q6ZNR0 172 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 NOXO1Q8NFA2 376 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 OR10G9Q8NGN4 311 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 OR10G7Q8NGN6 311 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF524Q96C55 264 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 IL17FQ96PD4 163 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SPATA25Q9BR10 227 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 LPAR5Q9H1C0 372 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 CRIM1Q9NZV1 1036 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 B4DSR2 109 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 K7N7A8 449 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 M0R2P5 195 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SYNGR1O43759 233 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM258P61165 79 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms