RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ACTL10Q5JWF8 245 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 SAMD10Q9BYL1 202 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-202ENST00000339570 TRBV20OR9-2A0A075B6H5 130 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 TMEM250H0YL14 139 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 FOSL1P15407 271 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 BAGE2Q86Y30 109 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 R3HDM4Q96D70 268 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 GCM1Q9NP62 436 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 DUSP13Q9UII6 198 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 POLDIP2Q9Y2S7 368 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 POLR3KQ9Y2Y1 108 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-202ENST00000339570 DMXL1Q9Y485 3027 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 TMEM30CPA0ZSE6 113 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 M0R1X1 148 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 IER3P46695 156 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 SSPNQ14714 243 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 RNPS1Q15287 305 aaKnown RBP13.47□□□□□ -0.25
SCARB1-202ENST00000339570 VHLLQ6RSH7 139 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
SCARB1-202ENST00000339570 FOXH1O75593 365 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 FXYD3Q14802 87 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 UTF1Q5T230 341 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 TMEM45BQ96B21 275 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 PARD6AQ9NPB6 346 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
SCARB1-202ENST00000339570 NTN3O00634 580 aaPredicted RBP13.46□□□□□ -0.25
SCARB1-202ENST00000339570 TIMM8AO60220 97 aaPredicted RBP13.46□□□□□ -0.25
SCARB1-202ENST00000339570 CDKN1AP38936 164 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 GBGT1Q8N5D6 347 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 OR4A16Q8NH70 328 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 TRAV34A0A0B4J273 112 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 C17orf112F2Z3M2 114 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 GATA2P23769 480 aaPredicted RBP13.46□□□□□ -0.25
SCARB1-202ENST00000339570 TFPI2P48307 235 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 KRTDAPP60985 99 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 OCC1Q8TAD7 63 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 HSPB9Q9BQS6 159 aa13.46□□□□□ -0.25
SCARB1-202ENST00000339570 INTS1Q8N201 2190 aaKnown RBP13.46□□□□□ -0.26
SCARB1-202ENST00000339570 ADGRG4Q8IZF6 3080 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 PLXNB1O43157 2135 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 CLDN14O95500 239 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.26
SCARB1-202ENST00000339570 FAM201AQ5SY85 155 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 NHLRC2Q8NBF2 726 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 COQ2Q96H96 371 aa13.46□□□□□ -0.26
SCARB1-202ENST00000339570 GCGP01275 180 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 GPR12P47775 334 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 SRSF7Q16629 238 aaKnown RBP eCLIP13.45□□□□□ -0.263e-6■■■■□ 20.4
SCARB1-202ENST00000339570 SFRP2Q96HF1 295 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 SMPD2O60906 423 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 NUTF2P61970 127 aaKnown RBP13.45□□□□□ -0.26
SCARB1-202ENST00000339570 NOL4LQ96MY1 436 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-202ENST00000339570 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 MRPL37Q9BZE1 423 aaKnown RBP13.45□□□□□ -0.26
SCARB1-202ENST00000339570 MS4A5Q9H3V2 200 aa13.45□□□□□ -0.26
SCARB1-202ENST00000339570 C15orf62A8K5M9 175 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 IGHEP01854 428 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 MBP02144 154 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 RNFT1Q5M7Z0 435 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 FBXW9Q5XUX1 488 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 SERTAD4Q9NUC0 356 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PIEZO2Q9H5I5 2752 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 FCN1O00602 326 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 KLF14Q8TD94 323 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-202ENST00000339570 LINC00470Q9BZP3 86 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PKIBQ9C010 78 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PMS2P5A8MQ11 134 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 MKRN2OSH3BPM6 223 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 LAMTOR5O43504 91 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 SERF1AO75920 110 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PMCHP20382 165 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 DCAF10Q5QP82 559 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 MOB3BQ86TA1 216 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 CISD2Q8N5K1 135 aaKnown RBP13.44□□□□□ -0.26
SCARB1-202ENST00000339570 OR4P4Q8NGL7 312 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 IER2Q9BTL4 223 aa13.44□□□□□ -0.26
SCARB1-202ENST00000339570 OR10J4P0C629 311 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 PRB4P10163 310 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-202ENST00000339570 HES3Q5TGS1 186 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 DOLPP1Q86YN1 238 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 ATOH7Q8N100 152 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 DEFB108BQ8NET1 73 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 TACC2O95359 2948 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 PCNX2A6NKB5 2137 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 PCSK5Q92824 1860 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 M0R143 59 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 MLNRO43193 412 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 GGCTO75223 188 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 297.7 ms