RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 HTD2P86397 168 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 RPL39P5Q59GN2 51 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 FFAR4Q5NUL3 377 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 UTF1Q5T230 341 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 C1QL4Q86Z23 238 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 GATAD1Q8WUU5 269 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 TIMM9Q9Y5J7 89 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 CACNA1BQ00975 2339 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 DUTP33316 252 aaKnown RBP13.51□□□□□ -0.25
LITAF-201ENST00000339430 MORN2Q502X0 79 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 TIMM23BQ5SRD1 257 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 TET2Q6N021 2002 aaPredicted RBP13.51□□□□□ -0.25
LITAF-201ENST00000339430 OR10G9Q8NGN4 311 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 OR10G7Q8NGN6 311 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 LEAP2Q969E1 77 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 M0R1X1 148 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 IFNA1P01562 189 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 S100A9P06702 114 aaKnown RBP13.5□□□□□ -0.25
LITAF-201ENST00000339430 MZT1Q08AG7 82 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 ATP6V1FQ16864 119 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 JKAMPQ9P055 326 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 LAMP3Q9UQV4 416 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 A0A1B0GWJ7 208 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 YIF1AO95070 293 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 S100A8P05109 93 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 ZNF134P52741 427 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 CD81P60033 236 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 C22orf34Q6ZV56 151 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 TCTEX1D1Q8N7M0 179 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 EDARADDQ8WWZ3 215 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 SSX3Q99909 188 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 SDF2L1Q9HCN8 221 aa13.5□□□□□ -0.25
LITAF-201ENST00000339430 CLN5O75503 358 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 CENPVQ7Z7K6 275 aaPredicted RBP13.49□□□□□ -0.25
LITAF-201ENST00000339430 Q8TCH9 128 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 ITLN1Q8WWA0 313 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
LITAF-201ENST00000339430 P2RX4Q99571 388 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 ELOVL5Q9NYP7 299 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 MGST3O14880 152 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 CRYAAP02489 173 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 GZMHP20718 246 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 CCKARP32238 428 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 NDUFA6P56556 154 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 KLF3P57682 345 aaPredicted RBP13.49□□□□□ -0.25
LITAF-201ENST00000339430 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 RPUSD4Q96CM3 377 aaKnown RBP13.49□□□□□ -0.25
LITAF-201ENST00000339430 MEGF10Q96KG7 1140 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 SNX22Q96L94 193 aa13.49□□□□□ -0.25
LITAF-201ENST00000339430 MRPL37Q9BZE1 423 aaKnown RBP13.49□□□□□ -0.25
LITAF-201ENST00000339430 CTXND1A0A1B0GTU2 59 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 CXorf65A6NEN9 183 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 B4DEV8 164 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 SLC31A2O15432 143 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 MEF2BQ02080 365 aaPredicted RBP13.48□□□□□ -0.25
LITAF-201ENST00000339430 WDR25Q64LD2 544 aaPredicted RBP13.48□□□□□ -0.25
LITAF-201ENST00000339430 DUX4L9Q6RFH8 374 aaPredicted RBP13.48□□□□□ -0.25
LITAF-201ENST00000339430 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
LITAF-201ENST00000339430 SEBOXQ9HB31 216 aaPredicted RBP13.48□□□□□ -0.25
LITAF-201ENST00000339430 RAI1Q7Z5J4 1906 aaPredicted RBP13.48□□□□□ -0.25
LITAF-201ENST00000339430 C16orf97H3BN30 126 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 TRGC2P03986 189 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 SMIM6P0DI80 62 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
LITAF-201ENST00000339430 ADIRFQ15847 76 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 OR6C3Q9NZP0 311 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 JPT1Q9UK76 154 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 PLCE1Q9P212 2302 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 CFAP46Q8IYW2 2715 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
LITAF-201ENST00000339430 LOXL3P58215 753 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 C1orf229Q6ZS94 237 aaPredicted RBP13.47□□□□□ -0.25
LITAF-201ENST00000339430 FAM90A1Q86YD7 464 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 FAM169BQ8N8A8 192 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 DSCAML1Q8TD84 2053 aa13.47□□□□□ -0.25
LITAF-201ENST00000339430 YLPM1P49750 1951 aaKnown RBP13.47□□□□□ -0.25
LITAF-201ENST00000339430 SMCO3A2RU48 225 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 HPRT1P00492 218 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 PSMB3P49720 205 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 PAX5Q02548 391 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 GCSAMLQ5JQS6 135 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 C1orf174Q8IYL3 243 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 OR4A16Q8NH70 328 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 PPP1R35Q8TAP8 253 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
LITAF-201ENST00000339430 EPG5Q9HCE0 2579 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 CLDN34H7C241 214 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 YPEL1O60688 119 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 IFNA10P01566 189 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 GLRXP35754 106 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 GNB2P62879 340 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 DEFB108BQ8NET1 73 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms