RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SAV1Q9H4B6 383 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 JKAMPQ9P055 326 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RNF7Q9UBF6 113 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 IL19Q9UHD0 177 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 DOCK11Q5JSL3 2073 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 DPRXA6NFQ7 191 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RBFOX2O43251 390 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MMP23AO75900 390 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 BCL2P10415 239 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 EDDM3BP56851 147 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF787Q6DD87 383 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MRGPRGQ86SM5 289 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 VKORC1L1Q8N0U8 176 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CISD2Q8N5K1 135 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TMEM170AQ8WVE7 144 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TMEM147Q9BVK8 224 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 GFOD1Q9NXC2 390 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CISD1Q9NZ45 108 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 LAMP3Q9UQV4 416 aa10.7□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RAI1Q7Z5J4 1906 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ADGRG4Q8IZF6 3080 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 A0A1W2PPE3 182 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MT-ND4LP03901 98 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 VDAC2P45880 294 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PDLIM3Q53GG5 364 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF788Q6ZQV5 615 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF561Q8N587 486 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FAM216BQ8N7L0 139 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 C2CD4CQ8TF44 421 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 SNRNP40Q96DI7 357 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 LINC00574Q9H8X3 128 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 OR6C3Q9NZP0 311 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 GAB2Q9UQC2 676 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF835Q9Y2P0 537 aa10.69□□□□□ -0.7
CDK5RAP1-201ENST00000339269 KBTBD11-OT1A0A1B0GTJ5 212 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 hCG_1809904A0A1W2PP81 198 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 A0A1W2PR64 198 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 A0A1W2PRV1 198 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PCP4L1A6NKN8 68 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FAM90A9PA6NNJ1 464 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PRSS46E5RG02 174 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 HPRT1P00492 218 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 AGAP20933 346 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 GNB2P62879 340 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RELBQ01201 579 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 HNF4GQ14541 408 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ADIPOQQ15848 244 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ATP6V1FQ16864 119 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RNF212Q495C1 297 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TEX36Q5VZQ5 186 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 C16orf54Q6UWD8 224 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CCL13Q99616 98 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FAM234AQ9H0X4 552 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MAP1LC3B2A6NCE7 125 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF727A8MUV8 499 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 GYPAP02724 150 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PMS2P11Q13670 270 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FAM209BQ5JX69 171 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF429Q86V71 674 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FAM24BQ8N5W8 94 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 DEFB108BQ8NET1 73 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CIB3Q96Q77 187 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MAP1LC3BQ9GZQ8 125 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF462Q96JM2 2506 aa10.68□□□□□ -0.7
CDK5RAP1-201ENST00000339269 HCFC1P51610 2035 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 SAA2-SAA4A0A096LPE2 208 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CEBPZOSA8MTT3 80 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 C16orf97H3BN30 126 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 SAA2P0DJI9 122 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 RAB5AP20339 215 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 FGF7P21781 194 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PTAFRP25105 342 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 DLK1P80370 383 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 SSX9Q7RTT3 188 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZGRF1Q86YA3 2104 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNF383Q8NA42 475 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 NPCDR1Q9BY65 106 aa10.67□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZFP92A6NM28 416 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CEBPGP53567 150 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZCCHC24Q8N2G6 241 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 OR10P1Q8NGE3 313 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 CORO2AQ92828 525 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 MALSU1Q96EH3 234 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 C1orf159Q96HA4 380 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ZNRD1Q9P1U0 126 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 TET2Q6N021 2002 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 ROS1P08922 2347 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 A0A087WWC5 75 aa10.66□□□□□ -0.7
CDK5RAP1-201ENST00000339269 PRRG2O14669 202 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms