RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FAM90A24PP0C7X0 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF688P0C7X2 276 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CD38P28907 300 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 LTBRP36941 435 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 VDAC2P45880 294 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CBLN3Q6UW01 205 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 OOSP2Q86WS3 158 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 Q8TCH9 128 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF480Q8WV37 535 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF581Q9P0T4 197 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 A0A0A6YYD5 115 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LINC01553A4QN01 128 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF121P58317 390 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF766Q5HY98 468 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LINC01545Q5VT33 79 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LYSMD4Q5XG99 296 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ATOH7Q8N100 152 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 IRF7Q92985 503 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 DLX4Q92988 240 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 B4GALT6Q9UBX8 382 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TAF1LQ8IZX4 1826 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C2orf70A6NJV1 201 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 E9PLD3 99 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C11orf98E9PRG8 122 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 PLPP1O14494 284 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TNFSF14O43557 240 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 CLDN7O95471 211 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 MT-CO3P00414 261 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 COL9A1P20849 921 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RPL30P62888 115 aaKnown RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ETDBQ3ZM63 59 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LHX8Q68G74 356 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM211Q6ICI0 200 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 DGAT2L6Q6ZPD8 337 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TCF23Q7RTU1 214 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LINC01465Q8N7H1 131 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 OR2T6Q8NHC8 308 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RPEQ96AT9 228 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RASL11BQ9BPW5 248 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 CFHR5Q9BXR6 569 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 B9D1Q9UPM9 204 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TRBV20-1A0A075B6N2 111 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 FOXI3A8MTJ6 420 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 SRSF10O75494 262 aaKnown RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 NDUFB4O95168 129 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 CELA3BP08861 270 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00310P59036 64 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 FNDC7Q5VTL7 733 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00114Q6XXX2 140 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 Q6ZS49 121 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 CT55Q8WUE5 264 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ARHGAP5-AS1Q96IT6 56 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 DUX3Q96PT4 197 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM121BQ9BXQ6 578 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 THAP10Q9P2Z0 257 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 SLC25A10Q9UBX3 287 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 V9GYY9 64 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 NPIPB5A8MRT5 1133 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C9JAW5 83 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 IL4P05112 153 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 CA3P07451 260 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 SELPP16109 830 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 UNC119Q13432 240 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 STPG1Q5TH74 334 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 FAM231DQ6ZW35 169 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 PRR13Q9NZ81 148 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 HIGD1AQ9Y241 93 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 LOXL2Q9Y4K0 774 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 IGLL5B9A064 214 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 OPRK1P41145 380 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TNFAIP6P98066 277 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RNPS1Q15287 305 aaKnown RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 UTF1Q5T230 341 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TSPO2Q5TGU0 170 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TEX36Q5VZQ5 186 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 OTPQ5XKR4 325 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 Q6AWC8 147 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 SLC23A3Q6PIS1 610 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 OR13A1Q8NGR1 328 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 STARD5Q9NSY2 213 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 HRASLS2Q9NWW9 162 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 MYBPHLA2RUH7 354 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 JMJD7P0C870 316 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 SEC61GP60059 68 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 TEX45Q8NA69 505 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 NUP35Q8NFH5 326 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF721Q8TF20 911 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RDH5Q92781 318 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 WFDC6Q9BQY6 131 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C19orf24Q9BVV8 132 aa3.5□□□□□ -1.85
NEDD4-201ENST00000338963 RBM24Q9BX46 236 aaKnown RBP3.5□□□□□ -1.85
NEDD4-201ENST00000338963 C2CD4DB7Z1M9 353 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 EML2O95834 649 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 DAP3P51398 398 aaKnown RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 GNB1P62873 340 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 MYBPHQ13203 477 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 SPATA31B1PQ5VZV4 182 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 TEN1Q86WV5 123 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 LYPD6Q86Y78 171 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms