RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KCNAB3O43448 404 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 IGHG2P01859 326 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 RPA2P15927 270 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 NQO2P16083 231 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 PPP1R27Q86WC6 154 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 CADM3Q8N126 398 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 COMMD9Q9P000 198 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 KCNIP3Q9Y2W7 256 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 SIGLEC9Q9Y336 463 aa12.19□□□□□ -0.46
SEC13-201ENST00000337354 TEX13DA0A0J9YY54 714 aaPredicted RBP12.18□□□□□ -0.46
SEC13-201ENST00000337354 H0Y980 276 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SLC25A17O43808 307 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 CREBL2O60519 120 aaPredicted RBP12.18□□□□□ -0.46
SEC13-201ENST00000337354 NDUFB6O95139 128 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SERPINE2P07093 398 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 CRYGBP07316 175 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 LPAR6P43657 344 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 POU2AF1Q16633 256 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 ARSJQ5FYB0 599 aaPredicted RBP12.18□□□□□ -0.46
SEC13-201ENST00000337354 C9orf152Q5JTZ5 239 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 Q6ZS46 218 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SGPP2Q8IWX5 399 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 RHOVQ96L33 236 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 RNF114Q9Y508 228 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 DNHD1Q96M86 4753 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 OR2A4O95047 310 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 VSIG10L2P0DP72 767 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 CCR6P51684 374 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 DHODHQ02127 395 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 ASAH1Q13510 395 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SLC35E3Q7Z769 313 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEC13-201ENST00000337354 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 OR2A7Q96R45 310 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 TSC22D3Q99576 134 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 NAA60Q9H7X0 242 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SERTAD4Q9NUC0 356 aa12.18□□□□□ -0.46
SEC13-201ENST00000337354 SH2D7A6NKC9 451 aaPredicted RBP12.17□□□□□ -0.46
SEC13-201ENST00000337354 ATG12O94817 140 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
SEC13-201ENST00000337354 SLC6A1P30531 599 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 BTCP35070 178 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 VDAC2P45880 294 aaPredicted RBP12.17□□□□□ -0.46
SEC13-201ENST00000337354 CX3CL1P78423 397 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 AWAT1Q58HT5 328 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 TP53RKQ96S44 253 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 BET1LQ9NYM9 111 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
SEC13-201ENST00000337354 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 AP4M1O00189 453 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 FCN1O00602 326 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 S1PR2O95136 353 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 IGF1P05019 195 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 FGF2P09038 288 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
SEC13-201ENST00000337354 ANXA3P12429 323 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 AKR1C4P17516 323 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 UCP1P25874 307 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 PROK1P58294 105 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 DEFA1P59665 94 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 DEFA3P59666 94 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 UBE2MP61081 183 aaKnown RBP12.16□□□□□ -0.46
SEC13-201ENST00000337354 ERVK-16P61578 105 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 IFITM3Q01628 133 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 PRSS8Q16651 343 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 TMED4Q7Z7H5 227 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 PUSL1Q8N0Z8 303 aaKnown RBP12.16□□□□□ -0.46
SEC13-201ENST00000337354 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
SEC13-201ENST00000337354 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 TMEM230Q96A57 120 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 R3HDM4Q96D70 268 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 OR51J1Q9H342 316 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 TBC1D24Q9ULP9 559 aa12.16□□□□□ -0.46
SEC13-201ENST00000337354 FAM240BA0A1B0GVZ2 78 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 HAX1O00165 279 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 KBTBD11O94819 623 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 CDS2O95674 445 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 KRASP01116 189 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 IL6RP08887 468 aaPredicted RBP12.15□□□□□ -0.46
SEC13-201ENST00000337354 OR5AC1P0C628 307 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 SP6Q3SY56 376 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms