RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 WDR54Q9H977 334 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 GCSHP23434 173 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 FAM89BQ8N5H3 189 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 RNASE7Q9H1E1 156 aaKnown RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 FBLN5Q9UBX5 448 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 WIPF3A6NGB9 483 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 GZMHP20718 246 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 MAS1LP35410 378 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 OPRK1P41145 380 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 UCP2P55851 309 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 BPIFB3P59826 476 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 OCC1Q8TAD7 63 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 POM121L2Q96KW2 1035 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 PCED1AQ9H1Q7 454 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 A0A1B0GW64 132 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 TMEM210A6NLX4 147 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 PRSS1P07477 247 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 NPY1RP25929 384 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 FGF12P61328 243 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 OR2M3Q8NG83 312 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 HES4Q9HCC6 221 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF355PQ9NSJ1 428 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
COL2A1-201ENST00000337299 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 PSG1P11464 419 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 COL8A1P27658 744 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 CSN1S1P47710 185 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
COL2A1-201ENST00000337299 RND2P52198 227 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 QRFPP83859 136 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 DNLZQ5SXM8 178 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 FAM27BQ5VT28 67 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 VKORC1L1Q8N0U8 176 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF837Q96EG3 531 aaPredicted RBP11.28□□□□□ -0.6
COL2A1-201ENST00000337299 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 TMSB15BA0A087X1C1 80 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 CCL3P10147 92 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 ARR3P36575 388 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 NXPH1P58417 271 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 SCCPDHQ8NBX0 429 aa11.28□□□□□ -0.6
COL2A1-201ENST00000337299 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
COL2A1-201ENST00000337299 A0A0J9YW62 118 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 ODAMA1E959 279 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 P01737 135 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 AMY1AP04745 511 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.6
COL2A1-201ENST00000337299 PRRX1P54821 245 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 GNB1P62873 340 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 OR1L1Q8NH94 360 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 VWCEQ96DN2 955 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 GNB4Q9HAV0 340 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 RAB9BQ9NP90 201 aa11.27□□□□□ -0.6
COL2A1-201ENST00000337299 DOCK10Q96BY6 2186 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 FABP2P12104 132 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 EPHA8P29322 1005 aaPredicted RBP11.27□□□□□ -0.61
COL2A1-201ENST00000337299 RAC1P63000 192 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 NUDT10Q8NFP7 164 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
COL2A1-201ENST00000337299 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 SSBP4Q9BWG4 385 aaPredicted RBP11.27□□□□□ -0.61
COL2A1-201ENST00000337299 CLEC5AQ9NY25 188 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 PCNX1Q96RV3 2341 aa11.27□□□□□ -0.61
COL2A1-201ENST00000337299 LTBRP36941 435 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 RIPPLY2Q5TAB7 128 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
COL2A1-201ENST00000337299 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 LYZL4Q96KX0 146 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 DEPPQ9NTK1 212 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM56-RWDD3S4R434 201 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 H3BUT2 72 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 K7EQM0 130 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 CORTO00230 105 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 CGAP01215 116 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
COL2A1-201ENST00000337299 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
COL2A1-201ENST00000337299 DEFB127Q9H1M4 99 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms