RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SP6Q3SY56 376 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 VMA21Q3ZAQ7 101 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 Q6ZS46 218 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 SGPP2Q8IWX5 399 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 CENPSQ8N2Z9 138 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 PLEKHA2Q9HB19 425 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 TSPAN9O75954 239 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 NDUFA7O95182 113 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 SERPINE2P07093 398 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 CRYGBP07316 175 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 HKR1P10072 659 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 TAS2R31P59538 309 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 UBE2KP61086 200 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 LIN54Q6MZP7 749 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 SSX9Q7RTT3 188 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 ENKURQ8TC29 256 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 COMMD9Q9P000 198 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
APOBEC3B-202ENST00000335760 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 RPA2P15927 270 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 NQO2P16083 231 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TRIM16LQ309B1 348 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TMEM128Q5BJH2 165 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 SLC25A42Q86VD7 318 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 OR4F5Q8NH21 305 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 R3HDM4Q96D70 268 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 RHOVQ96L33 236 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 C16orf95Q9H693 158 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 SIGLEC9Q9Y336 463 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TRAV6A0A075B6T7 132 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 FCN1O00602 326 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 OR2A4O95047 310 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 KRASP01116 189 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 IGKV1-39P01597 117 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 IGKV1D-39P04432 117 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 ANXA3P12429 323 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 UCP1P25874 307 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 G6PCP35575 357 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 ERVK-16P61578 105 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 SUPT4H1P63272 117 aaKnown RBP11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 DHODHQ02127 395 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 PUSL1Q8N0Z8 303 aaKnown RBP11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 Q8N2B8 174 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 DMBX1Q8NFW5 382 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 OR2T6Q8NHC8 308 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 OR2A7Q96R45 310 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 C19orf24Q9BVV8 132 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 BEX1Q9HBH7 125 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 NUDT15Q9NV35 164 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
APOBEC3B-202ENST00000335760 LINC01548A6NM66 108 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 MARCH11A6NNE9 402 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 CA2P00918 260 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 HLA-DRB1P01911 266 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 H2AFB2P0C5Z0 115 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 VAMP1P23763 118 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 PJVKQ0ZLH3 352 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 PPP1R1AQ13522 171 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM187Q14656 261 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 POU2AF1Q16633 256 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 PRSS8Q16651 343 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR4A47Q6IF82 309 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 SLC35E3Q7Z769 313 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 PALMDQ9NP74 551 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM140Q9NV12 185 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 NUBP2Q9Y5Y2 271 aa11.15□□□□□ -0.63
APOBEC3B-202ENST00000335760 IGHV7-81A0A0B4J1V7 117 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 KBTBD11O94819 623 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 SFT2D2O95562 160 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 IGHG2P01859 326 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR4E1P0C645 316 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 MDKP21741 143 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 GNB1P62873 340 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 FOXL1Q12952 345 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms