RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 H1F0P07305 194 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GATA1P15976 413 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PI3P19957 117 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RAB3AP20336 220 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CXCR1P25024 350 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PTGFRP43088 359 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PSMB3P49720 205 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RPS16P62249 146 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 HMGN3Q15651 99 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CYBRD1Q53TN4 286 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM97Q5BJF2 176 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 DMRTC1Q5HYR2 192 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SPANXN4Q5MJ08 99 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FAM222AQ5U5X8 452 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 XAF1Q6GPH4 301 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 NIPAL3Q6P499 406 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SPAG11AQ6PDA7 123 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CBLN3Q6UW01 205 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM107Q6UX40 140 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PTCHD4Q6ZW05 846 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CCDC190Q86UF4 302 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 LINC01561Q8N1V8 128 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ZCCHC24Q8N2G6 241 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FAM89BQ8N5H3 189 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 C2orf73Q8N5S3 287 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 POC5Q8NA72 575 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR4C5Q8NGB2 326 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR13A1Q8NGR1 328 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR4C3Q8NH37 302 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 DYNC2LI1Q8TCX1 351 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 C15orf40Q8WUR7 153 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RTN4IP1Q8WWV3 396 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RFKQ969G6 155 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 Q96MT0 163 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FNDC4Q9H6D8 234 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CRLF2Q9HC73 371 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 S100A14Q9HCY8 104 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 EMC7Q9NPA0 242 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SPANXA1Q9NS26 97 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF319Q9P2F9 582 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 EXOSC1Q9Y3B2 195 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 A0A1B0GVG6 124 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GNG14A0A1W2PPG7 69 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 HSBP1L1C9JCN9 74 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CDIPTO14735 213 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FFAR1O14842 300 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 MAGEB4O15481 346 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GSTZ1O43708 216 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TIMM8AO60220 97 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RBMXL2O75526 392 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GAS8-AS1O95177 125 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RENP00797 406 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GIG44P09565 113 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CTXN2P0C2S0 81 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ESDP10768 282 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 HLA-GP17693 338 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TBPP20226 339 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 HSD11B1P28845 292 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GJC1P36383 396 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CDKN1BP46527 198 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FXYD6P3P58550 94 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TAS2R60P59551 318 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RAB8AP61006 207 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RAB14P61106 215 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 UFM1P61960 85 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GNGT1P63211 74 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RBM39Q14498 530 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TIGD2Q4W5G0 525 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 MORN2Q502X0 79 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PAN3Q58A45 887 aaKnown RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 C6orf141Q5SZD1 244 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PDZK1Q5T2W1 519 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SYT6Q5T7P8 510 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GPR141Q7Z602 305 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 LRP11Q86VZ4 500 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 STX12Q86Y82 276 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CTAGE3PQ8IX95 158 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 BOD1L2Q8IYS8 172 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CENPSQ8N2Z9 138 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FAM86B1Q8N7N1 296 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T12Q8NG77 320 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR51A2Q8NGJ7 313 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OR8J1Q8NGP2 316 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 OTOSQ8NHW6 89 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FANK1Q8TC84 345 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GPR151Q8TDV0 419 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RAB2BQ8WUD1 216 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SAT2Q96F10 170 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 NSL1Q96IY1 281 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CNBD2Q96M20 576 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TSPAN32Q96QS1 320 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 RBP7Q96R05 134 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 PANX1Q96RD7 426 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SDHCQ99643 169 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 COL12A1Q99715 3063 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TCEAL7Q9BRU2 100 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CHAC1Q9BUX1 264 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 C20orf27Q9GZN8 174 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 CDH23Q9H251 3354 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms