RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
VPS33B-201ENST00000333371 FOXF2Q12947 444 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 GABRA6Q16445 453 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 VWA1Q6PCB0 445 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 TRIB1Q96RU8 372 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 WASF3Q9UPY6 502 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 CACNA1GO43497 2377 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 ZNF705GA8MUZ8 300 aaPredicted RBP10.25□□□□□ -0.77
VPS33B-201ENST00000333371 FCGR3BO75015 233 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 HRASP01112 189 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 GNB1P62873 340 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 SLC35E4Q6ICL7 350 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 Q8TCH9 128 aa10.25□□□□□ -0.77
VPS33B-201ENST00000333371 NEIL1Q96FI4 390 aaPredicted RBP10.25□□□□□ -0.77
VPS33B-201ENST00000333371 DMXL2Q8TDJ6 3036 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 TRAV3A0A0B4J244 114 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 TIMM8AO60220 97 aaPredicted RBP10.24□□□□□ -0.77
VPS33B-201ENST00000333371 C1QTNF9P0C862 333 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 NUBP1P53384 320 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 CD177Q8N6Q3 437 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 R3HDM4Q96D70 268 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 GMPPAQ96IJ6 420 aaPredicted RBP10.24□□□□□ -0.77
VPS33B-201ENST00000333371 RAB29O14966 203 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 NDUFB4O95168 129 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 PKIAP61925 76 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 PMS2P11Q13670 270 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 ATP6V1FQ16864 119 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 DEFB109BQ30KR1 87 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
VPS33B-201ENST00000333371 TRAV17A0A0B4J275 112 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 RRHO14718 337 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 TGOLN2O43493 480 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 WT1P19544 449 aaPredicted RBP10.23□□□□□ -0.77
VPS33B-201ENST00000333371 TGFBR3Q03167 851 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 RPL39P5Q59GN2 51 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 ZBTB34Q8NCN2 500 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 OR2T10Q8NGZ9 312 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 LEAP2Q969E1 77 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 OR6C3Q9NZP0 311 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 IGHV3OR15-7A0A075B7D8 119 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 MBP02144 154 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
VPS33B-201ENST00000333371 JOSD1Q15040 202 aaPredicted RBP10.23□□□□□ -0.77
VPS33B-201ENST00000333371 SPRNQ5BIV9 151 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 ZNF664Q8N3J9 261 aa10.23□□□□□ -0.77
VPS33B-201ENST00000333371 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
VPS33B-201ENST00000333371 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 TMEM210A6NLX4 147 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 IFNA10P01566 189 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 CD1BP29016 333 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 LINC01551Q86U37 167 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 DMRTC2Q8IXT2 367 aaPredicted RBP10.22□□□□□ -0.77
VPS33B-201ENST00000333371 ABHD12Q8N2K0 398 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
VPS33B-201ENST00000333371 DSCAML1Q8TD84 2053 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 CECR9P0C854 216 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 IL3RAP26951 378 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 VWC2Q2TAL6 325 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 MIC13Q5XKP0 118 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 C1orf229Q6ZS94 237 aaPredicted RBP10.22□□□□□ -0.77
VPS33B-201ENST00000333371 TCF23Q7RTU1 214 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 LRRC29Q8WV35 223 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 TMEM170AQ8WVE7 144 aa10.22□□□□□ -0.77
VPS33B-201ENST00000333371 C15orf65H3BRN8 121 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS33B-201ENST00000333371 ZNF134P52741 427 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 ACTL10Q5JWF8 245 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 PRAMEF5Q5TYX0 476 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 FAM214BQ7L5A3 538 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 REC114Q7Z4M0 266 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 TGIF2LYQ8IUE0 185 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 SSMEM1Q8WWF3 244 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 CXXC4Q9H2H0 198 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 GNG12Q9UBI6 72 aa10.21□□□□□ -0.77
VPS33B-201ENST00000333371 M0R1X1 148 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 AQP7O14520 342 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 IGHG3P01860 377 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 ARL14EPLP0DKL9 152 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 NDUFB7P17568 137 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 DUTP33316 252 aaKnown RBP10.21□□□□□ -0.78
VPS33B-201ENST00000333371 GPR12P47775 334 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 ACOT6Q3I5F7 207 aaPredicted RBP10.21□□□□□ -0.78
VPS33B-201ENST00000333371 Q6ZT83 130 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 LRP11Q86VZ4 500 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 CIB3Q96Q77 187 aaPredicted RBP10.21□□□□□ -0.78
VPS33B-201ENST00000333371 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.78
VPS33B-201ENST00000333371 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 ZNF320A2RRD8 509 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 ZNF891A8MT65 544 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 C17orf112F2Z3M2 114 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 DVL1O14640 695 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 NUPR1O60356 82 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 GGCTO75223 188 aaKnown RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SELLP14151 372 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms