RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ODAMA1E959 279 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 CCL25O15444 150 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 CARD18P57730 90 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 SUMO1P63165 101 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 MOB1BQ7L9L4 216 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 FAM58AQ8N1B3 248 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 ORAOV1Q8WV07 137 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 RAB1CQ92928 201 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNF703Q9H7S9 590 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 UQCR10Q9UDW1 63 aa15.16■□□□□ 0.02
CLSTN3-202ENST00000331148 SCO2A0A1W2PP80 73 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 FCN1O00602 326 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 COTL1Q14019 142 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 SAPCD1Q5SSQ6 148 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 OCC1Q8TAD7 63 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 C22orf15Q8WYQ4 148 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 QTRT1Q9BXR0 403 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 SH2D2AQ9NP31 389 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 CXCL13O43927 109 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 GPX1P07203 203 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 CCL2P13500 99 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 B3GALT5-AS1P59052 145 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 HLA-DRB5Q30154 266 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 KRTCAP3Q53RY4 240 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 LEMD1Q68G75 181 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 EP300Q09472 2414 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 CNTRLQ7Z7A1 2325 aa15.15■□□□□ 0.02
CLSTN3-202ENST00000331148 SLC17A3O00476 420 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 HYPMO75409 117 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 MMP23AO75900 390 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 IER3P46695 156 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 PTTG1IPP53801 180 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 LGALS4P56470 323 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 GGNQ86UU5 652 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 TMEM204Q9BSN7 226 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 LAMTOR2Q9Y2Q5 125 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 TBL2Q9Y4P3 447 aaKnown RBP15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A1W2PPV4 95 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 IGLC2P0DOY2 106 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 IGLC3P0DOY3 106 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF816Q0VGE8 651 aaPredicted RBP15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 Q6ZN92 141 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 GNB4Q9HAV0 340 aa15.14■□□□□ 0.01
CLSTN3-202ENST00000331148 PCSK5Q92824 1860 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 NKX6-3A6NJ46 265 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 SNURFLB1AK76 121 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 IGHV3-9P01782 118 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 FRMD6-AS1P0C7T7 363 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 HNRNPA3P51991 378 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 EDDM3BP56851 147 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 PSG7Q13046 419 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 TMPRSS7Q7RTY8 843 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 YRDCQ86U90 279 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 STARD4Q96DR4 205 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 TXN2Q99757 166 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 TXNDC17Q9BRA2 123 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 TRAPPC2LQ9UL33 140 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 K7EN84 100 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 SH2D1BO14796 132 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 ARL14EPLP0DKL9 152 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 KLF3P57682 345 aaPredicted RBP15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 SPINK9Q5DT21 86 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 Q6P435 159 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 WDR83OSQ9Y284 106 aa15.13■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF407Q9C0G0 2248 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 S1PR2O95136 353 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF497Q6ZNH5 498 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 NRN1Q9NPD7 142 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 AHCTF1Q8WYP5 2266 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 ITGB1BP1O14713 200 aa15.12■□□□□ 0.01
CLSTN3-202ENST00000331148 AMTP48728 403 aa15.11■□□□□ 0.01
CLSTN3-202ENST00000331148 RPL30P62888 115 aaKnown RBP15.11■□□□□ 0.01
CLSTN3-202ENST00000331148 C5orf30Q96GV9 206 aa15.11■□□□□ 0.01
CLSTN3-202ENST00000331148 KCNS1Q96KK3 526 aa15.11■□□□□ 0.01
CLSTN3-202ENST00000331148 DOCK11Q5JSL3 2073 aa15.11■□□□□ 0.01
CLSTN3-202ENST00000331148 TRBV9A0A0B4J1U6 114 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 SIRPB1O00241 398 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF253O75346 499 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 RHBDL1O75783 438 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 P04436 131 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 RPEL1Q2QD12 228 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF645Q8N7E2 425 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 OR2M7Q8NG81 312 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 OR10D3Q8NH80 312 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 SFXN3Q9BWM7 321 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 TNRC6AQ8NDV7 1962 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 C15orf62A8K5M9 175 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 SS18L1O75177 396 aaPredicted RBP15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 CD1BP29016 333 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 ABHD3Q8WU67 409 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 KCNE4Q8WWG9 221 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 GNB1LQ9BYB4 327 aa15.1■□□□□ 0.01
CLSTN3-202ENST00000331148 SAA2-SAA4A0A096LPE2 208 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A096LPE4 126 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A1W2PPZ6 126 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 K7EP13 123 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 AQP7O14520 342 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 TOMM40O96008 361 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms