RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 GCSAMQ8N6F7 178 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 CYB561D1Q8N8Q1 229 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 C5orf66Q9H5L9 145 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 IGKV3D-11A0A0A0MRZ8 115 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 A0A1B0GV72 72 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 SMPD2O60906 423 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 ZNF362Q5T0B9 420 aaPredicted RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 ASPHD2Q6ICH7 369 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 TMEM222Q9H0R3 208 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 SPANXN1Q5VSR9 72 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 Q6ZT83 130 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 HSPB9Q9BQS6 159 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 LOC105371267A0A1B0GV96 52 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 SYNGR3O43761 229 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 MELTFP08582 738 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 SCGB1A1P11684 91 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 IGHV1-2P23083 117 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 MARS2Q96GW9 593 aaKnown RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 A0A087WV48 116 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 PROB1E7EW31 1015 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 NDUFB4O95168 129 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 TBX6O95947 436 aaPredicted RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 TMEM252Q8N6L7 170 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 Q96M66 194 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 TICRRQ7Z2Z1 1910 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 CTXND1A0A1B0GTU2 59 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 PDE6DO43924 150 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 FABP2P12104 132 aa8.68□□□□□ -1.02
CHD3-201ENST00000330494 MRPL13Q9BYD1 178 aaKnown RBP8.68□□□□□ -1.02
CHD3-201ENST00000330494 GBF1Q92538 1859 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 HIST1H1BP16401 226 aaKnown RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 GPR132Q9UNW8 380 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 HELZP42694 1942 aaKnown RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 APCSP02743 223 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 RND2P52198 227 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 EMP1P54849 157 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 TM4SF20Q53R12 229 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 REC114Q7Z4M0 266 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 PUSL1Q8N0Z8 303 aaKnown RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 FBLIM1Q8WUP2 373 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 OR5P3Q8WZ94 311 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 RARRES2Q99969 163 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 DCTN5Q9BTE1 182 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 HKR1P10072 659 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 HOXA4Q00056 320 aaPredicted RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 IFITM2Q01629 132 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 OR2T8A6NH00 312 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 MUC1P15941 1255 aaPredicted RBP8.67□□□□□ -1.02
CHD3-201ENST00000330494 GGACTQ9BVM4 153 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 OR2A4O95047 310 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 CEACAM1P13688 526 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 GCSHP23434 173 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 RIGQ13278 110 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 Q5BKY6 102 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 RIPPLY2Q5TAB7 128 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 OR2A7Q96R45 310 aa8.67□□□□□ -1.02
CHD3-201ENST00000330494 CD1AP06126 327 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 STXBP6Q8NFX7 210 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 FANCMQ8IYD8 2048 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 PINLYPA6NC86 204 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 ZNF735P0CB33 412 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 METTL26Q96S19 204 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 MYO7BQ6PIF6 2116 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 MARCH11A6NNE9 402 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 hCG_38984A0A1B0GV85 526 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 GCGP01275 180 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 TNFSF10P50591 281 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 FXYD3Q14802 87 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 EIF4E3Q8N5X7 224 aaKnown RBP8.66□□□□□ -1.02
CHD3-201ENST00000330494 PKIBQ9C010 78 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
CHD3-201ENST00000330494 ISLRO14498 428 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 ID1P41134 155 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 C1orf100Q5SVJ3 147 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 C1orf174Q8IYL3 243 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 RLFQ13129 1914 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 DRAM1Q8N682 238 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 FAM131CQ96AQ9 280 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
CHD3-201ENST00000330494 PGPA6NDG6 321 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 MC5RP33032 325 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 H2BFSP57053 126 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 UNQ9370/PRO34162Q6UXP9 181 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 IGHV3OR16-8A0A075B7F1 116 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 H7C2G1 150 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 CDKN1AP38936 164 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 PDLIM4P50479 330 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 CALHM1Q8IU99 346 aa8.65□□□□□ -1.02
CHD3-201ENST00000330494 CRIPAKQ8N1N5 446 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms