RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 KPTNQ9Y664 436 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.26■□□□□ 0.034e-6■■■■□ 23.7
EXOSC3-201ENST00000327304 hCG_1809904A0A1W2PP81 198 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A1W2PPE2 198 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A1W2PR64 198 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A1W2PRV1 198 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 LEUTXA8MZ59 168 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 TOR1AO14656 332 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 CHST1O43916 411 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 HPRT1P00492 218 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 IGHV4-31P0DP07 118 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 RRASP10301 218 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 EWSR1Q01844 656 aaKnown RBP eCLIP15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 RPL7L1Q6DKI1 246 aaKnown RBP15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 EIF5AL1Q6IS14 154 aaKnown RBP15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 ODF3L1Q8IXM7 274 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 ZNRD1Q9P1U0 126 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 PRELID3BQ9Y3B1 194 aa15.26■□□□□ 0.03
EXOSC3-201ENST00000327304 KRASP01116 189 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 G6PCP35575 357 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 IZUMO4Q1ZYL8 232 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 RPL39P5Q59GN2 51 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 C1orf122Q6ZSJ8 110 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 VMO1Q7Z5L0 202 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 UBAC2Q8NBM4 344 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 ADTRPQ96IZ2 230 aa15.25■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A087X0M5 115 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 SAA2-SAA4A0A096LPE2 208 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A1B0GX30 115 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 SYNGR2O43760 224 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 SAA2P0DJI9 122 aaPredicted RBP15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 COX7A1P24310 79 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 THBS3P49746 956 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 CAV2P51636 162 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 ARHGDIBP52566 201 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 BAXQ07812 192 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 TMEM252Q8N6L7 170 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 DDB2Q92466 427 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 S1PR3Q99500 378 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 ZNF251Q9BRH9 671 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 HIF1ANQ9NWT6 349 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 WSB1Q9Y6I7 421 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 SETXQ7Z333 2677 aaKnown RBP15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 FAM24AA6NFZ4 105 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 TMEM50AO95807 157 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 PRTN3P24158 256 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 PAX9P55771 341 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 RPL23AP62750 156 aaKnown RBP15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 PAX8Q06710 450 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 KLRD1Q13241 179 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 MIDNQ504T8 468 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 LYG1Q8N1E2 194 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 C8orf31Q8N9H6 132 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 TMEM186Q96B77 213 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 TBX15Q96SF7 602 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 PCGF1Q9BSM1 259 aa15.24■□□□□ 0.03
EXOSC3-201ENST00000327304 BORCS7-ASMTA0A0B4J1R7 106 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 IGHV2-26A0A0B4J1V2 119 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 TRAV20A0A0B4J274 112 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 IGSF23A1L1A6 192 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 FAM90A9PA6NNJ1 464 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 SMAD7O15105 426 aaKnown RBP15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 FCGR3BO75015 233 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 TOX4O94842 621 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 LINC00205P59089 165 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 TAS2R30P59541 319 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 NHLH2Q02577 135 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 FAM74A1Q5RGS3 127 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 H2BFWTQ7Z2G1 175 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 COMMD7Q86VX2 200 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 ABHD12Q8N2K0 398 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 TNFRSF14Q92956 283 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 CITED4Q96RK1 184 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 SMIM3Q9BZL3 60 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 ARV1Q9H2C2 271 aa15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 UNKLQ9H9P5 680 aaKnown RBP15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.23■□□□□ 0.03
EXOSC3-201ENST00000327304 MED6O75586 246 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 NXPH3O95157 252 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 HCP5Q6MZN7 132 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 C1orf229Q6ZS94 237 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 PNKDQ8N490 385 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 RNF141Q8WVD5 230 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 R3HDM4Q96D70 268 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 BSCL2Q96G97 398 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 HSPB7Q9UBY9 170 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 OTOGQ6ZRI0 2925 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 ZNF469Q96JG9 3925 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 ANKRD34BA5PLL1 514 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 MARCH11A6NNE9 402 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 FGF16O43320 207 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 TGFAP01135 160 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 LINC00311Q8N616 119 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 OR4S2Q8NH73 311 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 OR9G1Q8NH87 305 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 ZNF596Q8TC21 504 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 SMIM8Q96KF7 97 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 CLEC7AQ9BXN2 247 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 PFDN2Q9UHV9 154 aa15.22■□□□□ 0.03
EXOSC3-201ENST00000327304 J3QR06 171 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms