RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KCNIP4Q6PIL6 250 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 UNQ6494/PRO21346Q6UXR6 183 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 CD177Q8N6Q3 437 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 TPRX1Q8N7U7 411 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 OR52E5Q8NH55 327 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 RFESDQ8TAC1 157 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 Q8TCH9 128 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 IMMP2LQ96T52 175 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 DCTN5Q9BTE1 182 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 PRO1933Q9H354 126 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 FUT9Q9Y231 359 aa7.23□□□□□ -1.25
CLK1-201ENST00000321356 A0A087X0M5 115 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 TRAV38-1A0A0B4J264 116 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 A0A1B0GX30 115 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 DEFB108AA8MXU0 73 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 F6UZH7 168 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 CDX4O14627 284 aaPredicted RBP7.22□□□□□ -1.25
CLK1-201ENST00000321356 TIMM8AO60220 97 aaPredicted RBP7.22□□□□□ -1.25
CLK1-201ENST00000321356 AGFG2O95081 481 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 HPRT1P00492 218 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 GCGP01275 180 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 IGLV1-44P01699 117 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 IL3RAP26951 378 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 OPRK1P41145 380 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 KIR2DL2P43627 348 aaPredicted RBP7.22□□□□□ -1.25
CLK1-201ENST00000321356 ATP5G3P48201 142 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 FOXL1Q12952 345 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 CR1LQ2VPA4 569 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 PLA2G2CQ5R387 149 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 TXNDC17Q9BRA2 123 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 JPT1Q9UK76 154 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 PRR14LQ5THK1 2151 aa7.22□□□□□ -1.25
CLK1-201ENST00000321356 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
CLK1-201ENST00000321356 URB1O60287 2271 aaKnown RBP7.22□□□□□ -1.25
CLK1-201ENST00000321356 A8MWP6 167 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 NDUFB4O95168 129 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 CRYAAP02489 173 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 CECR9P0C854 216 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 STAG3L2P0CL84 134 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 STAG3L3P0CL85 134 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 PRDX2P32119 198 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 GPR12P47775 334 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 CLEC12BQ2HXU8 276 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 ZNF718Q3SXZ3 478 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 MBNL2Q5VZF2 373 aaKnown RBP7.21□□□□□ -1.25
CLK1-201ENST00000321356 TREML4Q6UXN2 200 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 TMPRSS7Q7RTY8 843 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 TMEM37Q8WXS4 190 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 BTF3L4Q96K17 158 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 NOL4LQ96MY1 436 aaPredicted RBP7.21□□□□□ -1.25
CLK1-201ENST00000321356 DERL1Q9BUN8 251 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 GGTLC1Q9BX51 225 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 CHODLQ9H9P2 273 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 MSL2Q9HCI7 577 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 BDP1A6H8Y1 2624 aa7.21□□□□□ -1.25
CLK1-201ENST00000321356 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 IGKV1D-17A0A075B6S4 117 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 A0A1W2PPV4 95 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 F2RL2O00254 374 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 RRHO14718 337 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 GFRA3O60609 400 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 YPEL1O60688 119 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 FCGR3BO75015 233 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 EGR1P18146 543 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 CHRNA7P36544 502 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 EDDM3BP56851 147 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 LOXL3P58215 753 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 RPP30P78346 268 aaKnown RBP7.21□□□□□ -1.26
CLK1-201ENST00000321356 RELBQ01201 579 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 PRSS8Q16651 343 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 MORN2Q502X0 79 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 HES3Q5TGS1 186 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 PRAMEF5Q5TYX0 476 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 VWA1Q6PCB0 445 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 DHRS13Q6UX07 377 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 ZNF114Q8NC26 417 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 LRRC29Q8WV35 223 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 TMEM18Q96B42 140 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 YPEL2Q96QA6 119 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 TRIB1Q96RU8 372 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 MGST2Q99735 147 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 MS4A5Q9H3V2 200 aa7.21□□□□□ -1.26
CLK1-201ENST00000321356 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
CLK1-201ENST00000321356 IGHV2OR16-5A0A0B4J2B6 119 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 TRGV8A0A0C4DH27 118 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 SRRM5B3KS81 715 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 C1QTNF9P0C862 333 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 HOXC12P31275 282 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 CCKARP32238 428 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 CFHR2P36980 270 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 FABP6P51161 128 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 CNN1P51911 297 aaKnown RBP7.2□□□□□ -1.26
CLK1-201ENST00000321356 UBE2G2P60604 165 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 LBHQ53QV2 105 aaPredicted RBP7.2□□□□□ -1.26
CLK1-201ENST00000321356 FAM78BQ5VT40 261 aa7.2□□□□□ -1.26
CLK1-201ENST00000321356 CST9LP1Q5W188 147 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms