RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 FAM216AQ8WUB2 273 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 CIB3Q96Q77 187 aaPredicted RBP6.23□□□□□ -1.41
IFT88-201ENST00000319980 SLC35B3Q9H1N7 401 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 MS4A5Q9H3V2 200 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 KPTNQ9Y664 436 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 DOCK11Q5JSL3 2073 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 TRAV3A0A0B4J244 114 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 AKR1C3P42330 323 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 ELLP55199 621 aaPredicted RBP6.23□□□□□ -1.41
IFT88-201ENST00000319980 KLRB1Q12918 225 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 ETV3LQ6ZN32 361 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 TAF15Q92804 592 aaKnown RBP eCLIP6.23□□□□□ -1.41
IFT88-201ENST00000319980 ZNF251Q9BRH9 671 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 NDRG3Q9UGV2 375 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 DYSFO75923 2080 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 BTBD17A6NE02 478 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 ITGB1BP1O14713 200 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 RBFOX2O43251 390 aaKnown RBP eCLIP6.22□□□□□ -1.41
IFT88-201ENST00000319980 PPIHO43447 177 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 EIF3GO75821 320 aaKnown RBP eCLIP6.22□□□□□ -1.41
IFT88-201ENST00000319980 CD3EP07766 207 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 CCL3L1P16619 93 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 CEBPGP53567 150 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 LCN15Q6UWW0 184 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 LYPD2Q6UXB3 125 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 DDB2Q92466 427 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 H1FXQ92522 213 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 CORO2AQ92828 525 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 PINX1Q96BK5 328 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 C20orf24Q9BUV8 137 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 TMEM140Q9NV12 185 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 KIAA1456Q9P272 454 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 RPUSD1Q9UJJ7 312 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 LINC00312Q9Y6C7 94 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 ABCA4P78363 2273 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 PMS2P5A8MQ11 134 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 FCN3O75636 299 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 APOBEC3AP31941 199 aaPredicted RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 RAB2AP61019 212 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 SERF2P84101 59 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 ZNF383Q8NA42 475 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 ZNF439Q8NDP4 499 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 OR4S2Q8NH73 311 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 AIFM2Q9BRQ8 373 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 PSMG3Q9BT73 122 aaPredicted RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 LINC00574Q9H8X3 128 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 CISD1Q9NZ45 108 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 GAB2Q9UQC2 676 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 ANKHD1Q8IWZ3 2542 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 ACACBO00763 2458 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 M0R036 132 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 IFNA10P01566 189 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 HBE1P02100 147 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 CHRNB4P30926 498 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 RELBQ01201 579 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 TMEM200BQ69YZ2 307 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 DHRS7BQ6IAN0 325 aaPredicted RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 SLC25A48Q6ZT89 311 aaKnown RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 GAL3ST2Q9H3Q3 398 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 RPS10P5Q9NQ39 176 aa6.22□□□□□ -1.41
IFT88-201ENST00000319980 HEYLQ9NQ87 328 aaPredicted RBP6.22□□□□□ -1.41
IFT88-201ENST00000319980 NDUFB3O43676 98 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 SNRNP70P08621 437 aaKnown RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 FBP1P09467 338 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 OR8U8P0C7N1 319 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 KIR2DS2P43631 304 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 FGF8P55075 233 aaPredicted RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 SPCS3P61009 180 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 CDSNQ15517 529 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 ZNF726P1Q15940 193 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 ATP6V1FQ16864 119 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 SOHLH1Q5JUK2 328 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 SP5Q6BEB4 398 aaPredicted RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 ST6GALNAC3Q8NDV1 305 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 RXFP4Q8TDU9 374 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 RCC1LQ96I51 464 aaKnown RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 ZNF714Q96N38 554 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 GNG13Q9P2W3 67 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 TRAV20A0A0B4J274 112 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 IGHV1-69-2A0A0G2JMI3 117 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 A0A1B0GW64 132 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 ZFP92A6NM28 416 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 FAM90A9PA6NNJ1 464 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 C15orf62A8K5M9 175 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 DVL1O14640 695 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 IGKV1-16P04430 117 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 FGF7P21781 194 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 THBS3P49746 956 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 MEF2CQ06413 473 aaPredicted RBP6.21□□□□□ -1.42
IFT88-201ENST00000319980 AWAT1Q58HT5 328 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 LRRC10Q5BKY1 277 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 OR4A47Q6IF82 309 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 SSX7Q7RTT5 188 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 ABHD12Q8N2K0 398 aa6.21□□□□□ -1.42
IFT88-201ENST00000319980 CLDND2Q8NHS1 167 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms