RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 PPYP01298 95 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 IGLV2-14P01704 120 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 CRYGBP07316 175 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
HDDC2-201ENST00000318787 SLURP1P55000 103 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 UBE2KP61086 200 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 HERV-K104P61576 105 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 CDK10Q15131 360 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 GPR107Q5VW38 600 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 SSX9Q7RTT3 188 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 POC5Q8NA72 575 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
HDDC2-201ENST00000318787 DNAH3Q8TD57 4116 aa12.46□□□□□ -0.42
HDDC2-201ENST00000318787 IGHV4OR15-8A0A075B7B6 117 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 A0A087WW49 117 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 FAM25AB3EWG3 89 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 FAM25CB3EWG5 89 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 FAM25GB3EWG6 89 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 LINC01619G3V211 115 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 HPGDSO60760 199 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 PMP2P02689 132 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 PRSS3P35030 304 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-201ENST00000318787 FHL3Q13643 280 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 PRSS8Q16651 343 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 SNX29P2Q8IUI4 249 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 MFSD4AQ8N468 514 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 DCUN1D4Q92564 292 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 SLA2Q9H6Q3 261 aa12.45□□□□□ -0.42
HDDC2-201ENST00000318787 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-201ENST00000318787 ANKRD34BA5PLL1 514 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 CREBL2O60519 120 aaPredicted RBP12.44□□□□□ -0.42
HDDC2-201ENST00000318787 ECI1P42126 302 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 RFX2P48378 723 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 RORCP51449 518 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 DGCR2P98153 550 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 RUNX1Q01196 453 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 EGFEM1PQ0D2K5 195 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
HDDC2-201ENST00000318787 ASPHD1Q5U4P2 390 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 OR5H2Q8NGV7 314 aa12.44□□□□□ -0.42
HDDC2-201ENST00000318787 SRSF12Q8WXF0 261 aaKnown RBP12.44□□□□□ -0.42
HDDC2-201ENST00000318787 MRPS26Q9BYN8 205 aaKnown RBP12.44□□□□□ -0.42
HDDC2-201ENST00000318787 SULT1C2O00338 296 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 OVOL1O14753 267 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 LY86O95711 162 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 C10orf55Q5SWW7 151 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 OVCH2Q7RTZ1 564 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 GPR141Q7Z602 305 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ZNF2Q9BSG1 426 aaPredicted RBP12.43□□□□□ -0.42
HDDC2-201ENST00000318787 TNCP24821 2201 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 SAP30O75446 220 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ELK1P19419 428 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 CATR1Q13166 79 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 MRGPRG-AS1Q2M3A8 158 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 AADACL3Q5VUY0 350 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 MZT2AQ6P582 158 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ZNF818PQ6ZRF7 136 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 MMD2Q8IY49 270 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
HDDC2-201ENST00000318787 FYTTD1Q96QD9 318 aaKnown RBP12.43□□□□□ -0.42
HDDC2-201ENST00000318787 PRR25Q96S07 402 aa12.43□□□□□ -0.42
HDDC2-201ENST00000318787 ZMAT5Q9UDW3 170 aaKnown RBP12.43□□□□□ -0.42
HDDC2-201ENST00000318787 RAMP3O60896 148 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 OR2A4O95047 310 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 GABARAPO95166 117 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 APOA1P02647 267 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 PRH1P02810 166 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
HDDC2-201ENST00000318787 KIR2DS2P43631 304 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 TAS2R46P59540 309 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 CTF1Q16619 201 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 AP3S1Q92572 193 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 OR2A7Q96R45 310 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 HRASLSQ9HDD0 168 aa12.42□□□□□ -0.42
HDDC2-201ENST00000318787 A0A0G2JLM5 398 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 DPPA5A6NC42 116 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 H3BUA1 57 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 KBTBD11O94819 623 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 HRASP01112 189 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 OR9G9P0C7N8 305 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 RPA2P15927 270 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 HRH1P35367 487 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 TSPAN5P62079 268 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 EIF4EBP1Q13541 118 aaPredicted RBP12.41□□□□□ -0.42
HDDC2-201ENST00000318787 GIMAP1Q8WWP7 306 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 RHOVQ96L33 236 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 SPIN2AQ99865 258 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms