RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 CT45A6P0DMU7 189 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 CT45A5P0DMU8 189 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 CT45A7P0DMV0 189 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 GNB2P62879 340 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 TMEM267Q0VDI3 215 aaPredicted RBP12.82□□□□□ -0.36
CALR-201ENST00000316448 Q8N7P7 452 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 BPESC1Q9GZL8 116 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 RBKSQ9H477 322 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 PSENENQ9NZ42 101 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 COX6B1P14854 86 aa12.81□□□□□ -0.36
CALR-201ENST00000316448 RAB5CP51148 216 aa12.81□□□□□ -0.36
CALR-201ENST00000316448 BTNL8Q6UX41 500 aa12.81□□□□□ -0.36
CALR-201ENST00000316448 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
CALR-201ENST00000316448 TSNAXQ99598 290 aaKnown RBP12.81□□□□□ -0.36
CALR-201ENST00000316448 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
CALR-201ENST00000316448 IGHV2-5P01817 119 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 PLA2G2AP14555 144 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 ATP6V0CP27449 155 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 THBS3P49746 956 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 F2RL1P55085 397 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 LMO4P61968 165 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 TUSC1Q2TAM9 212 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 Q6ZRG5 221 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 OR4S2Q8NH73 311 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 ST6GALNAC6Q969X2 333 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 S1PR3Q99500 378 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 TMEM133Q9H2Q1 129 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 DFFBO76075 338 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 PJVKQ0ZLH3 352 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 ADTRPQ96IZ2 230 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 CACFD1Q9UGQ2 172 aa12.8□□□□□ -0.36
CALR-201ENST00000316448 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 OR9G9P0C7N8 305 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 METTL15P1P0C7V9 234 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 REG1BP48304 166 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 ARF6P62330 175 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 ARL16Q0P5N6 197 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 VKORC1L1Q8N0U8 176 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 C8orf31Q8N9H6 132 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 BPIFCQ8NFQ6 507 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 HRH4Q9H3N8 390 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 NUP50Q9UKX7 468 aa12.79□□□□□ -0.36
CALR-201ENST00000316448 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
CALR-201ENST00000316448 SPG11Q96JI7 2443 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 TRIM77I1YAP6 450 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 LIPFP07098 398 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 NQO2P16083 231 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 KRTAP10-9P60411 292 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 GNPNAT1Q96EK6 184 aaPredicted RBP12.78□□□□□ -0.36
CALR-201ENST00000316448 MRPL20Q9BYC9 149 aaKnown RBP12.78□□□□□ -0.36
CALR-201ENST00000316448 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 PDLIM4P50479 330 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 HBG1P69891 147 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 HBG2P69892 147 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 PAX2Q02962 417 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 PDLIM3Q53GG5 364 aaPredicted RBP12.78□□□□□ -0.36
CALR-201ENST00000316448 SPANXN5Q5MJ07 72 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 DTD1Q8TEA8 209 aa12.78□□□□□ -0.36
CALR-201ENST00000316448 FBN2P35556 2912 aa12.77□□□□□ -0.36
CALR-201ENST00000316448 CRYBG3Q68DQ2 2970 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 TRAV3A0A0B4J244 114 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 UMAD1C9J7I0 102 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 IGLV1-47P01700 117 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 COX7A1P24310 79 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 FHITP49789 147 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 ERVK-16P61578 105 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 LDLRAD2Q5SZI1 272 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 TMEM182Q6ZP80 229 aaPredicted RBP12.77□□□□□ -0.37
CALR-201ENST00000316448 SSX9Q7RTT3 188 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 RAB39BQ96DA2 213 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 CIB3Q96Q77 187 aaPredicted RBP12.77□□□□□ -0.37
CALR-201ENST00000316448 OR4C12Q96R67 309 aa12.77□□□□□ -0.37
CALR-201ENST00000316448 CRYZL1O95825 349 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 ATP5J2P56134 94 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 SRSF3P84103 164 aaKnown RBP12.76□□□□□ -0.37
CALR-201ENST00000316448 RUNX1Q01196 453 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 POU2AF1Q16633 256 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 HCP5Q6MZN7 132 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 OR10X1Q8NGY0 326 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 OR2G3Q8NGZ4 309 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 QTRT1Q9BXR0 403 aaKnown RBP12.76□□□□□ -0.37
CALR-201ENST00000316448 PARD6GQ9BYG4 376 aaPredicted RBP12.76□□□□□ -0.37
CALR-201ENST00000316448 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
CALR-201ENST00000316448 TMEM218A2RU14 115 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms