RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NAA60Q9H7X0 242 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 CR1P17927 2039 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 PROP1O75360 226 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 ARG1P05089 322 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 VAMP1P23763 118 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 SSTP61278 116 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 EIF4EBP1Q13541 118 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-201ENST00000315491 PEA15Q15121 130 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-201ENST00000315491 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 LHX4Q969G2 390 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 S1PR3Q99500 378 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 AMMECR1Q9Y4X0 333 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-201ENST00000315491 CSMD1Q96PZ7 3565 aa13.11□□□□□ -0.31
TUBB3-201ENST00000315491 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 COLCA2A8K830 154 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ODF3BA8MYP8 253 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 M0R1X1 148 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 SFT2D2O95562 160 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 HLA-AP01891 365 aaKnown RBP13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF16P17020 682 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF137PP52743 207 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 SUPT4H1P63272 117 aaKnown RBP13.1□□□□□ -0.31
TUBB3-201ENST00000315491 DHRS2Q13268 280 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 RNF212Q495C1 297 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF66Q6ZN08 573 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF833PQ6ZTB9 187 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 SLC16A13Q7RTY0 426 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 LYG2Q86SG7 212 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 C15orf54Q8N8G6 183 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 C2CD4CQ8TF44 421 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
TUBB3-201ENST00000315491 C1orf196B1AJZ1 125 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 BUB1B-PAK6H3BSN5 160 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 J3QLI3 93 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 WRBO00258 174 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 UBE2E1P51965 193 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 FAM71F2Q6NXP2 309 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 OR51H1Q8NH63 302 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 ST6GALNAC6Q969X2 333 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 HSD17B10Q99714 261 aaKnown RBP13.09□□□□□ -0.31
TUBB3-201ENST00000315491 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 A0A1W2PRD5 423 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 A0A1W2PRF3 423 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 A0A1W2PRM7 423 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 F2RP25116 425 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 DUTP33316 252 aaKnown RBP13.09□□□□□ -0.31
TUBB3-201ENST00000315491 SNRPEP62304 92 aaKnown RBP13.09□□□□□ -0.31
TUBB3-201ENST00000315491 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
TUBB3-201ENST00000315491 PJVKQ0ZLH3 352 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 CATR1Q13166 79 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 SMCO1Q147U7 214 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 SLC9A3R2Q15599 337 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 CASTOR1Q8WTX7 329 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 GALNT14Q96FL9 552 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
TUBB3-201ENST00000315491 METTL1Q9UBP6 276 aaKnown RBP13.09□□□□□ -0.31
TUBB3-201ENST00000315491 IFNA2P01563 188 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 FBP1P09467 338 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 OR5AC1P0C628 307 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 TPT1P13693 172 aaKnown RBP13.08□□□□□ -0.32
TUBB3-201ENST00000315491 HTR1DP28221 377 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 SMCO4Q9NRQ5 59 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
TUBB3-201ENST00000315491 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LINC00473A8K010 186 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 H0Y980 276 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LY6LH3BQJ8 138 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LINC00205P59089 165 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 DIAPH2-AS1Q14236 149 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 SP6Q3SY56 376 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 ZFP82Q8N141 532 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TCTEX1D2Q8WW35 142 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TP53RKQ96S44 253 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LIN7CQ9NUP9 197 aaKnown RBP13.07□□□□□ -0.32
TUBB3-201ENST00000315491 DPM3Q9P2X0 92 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TRAV40A0A0B4J280 105 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
TUBB3-201ENST00000315491 AVPP01185 164 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 REG1BP48304 166 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 THBS3P49746 956 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LGALS4P56470 323 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 LDLRAD2Q5SZI1 272 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 RBMS3Q6XE24 437 aaKnown RBP13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TGIF2LXQ8IUE1 241 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 RPEQ96AT9 228 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 MRPL20Q9BYC9 149 aaKnown RBP13.07□□□□□ -0.32
TUBB3-201ENST00000315491 PRR13Q9NZ81 148 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 TBL2Q9Y4P3 447 aaKnown RBP13.07□□□□□ -0.32
TUBB3-201ENST00000315491 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
TUBB3-201ENST00000315491 CT45A6P0DMU7 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms