RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 AKR1C8PQ5T2L2 129 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 COMMD1Q8N668 190 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 ADTRPQ96IZ2 230 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 TMEM140Q9NV12 185 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 PKD1L2Q7Z442 2459 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 FAM157AC9JC47 383 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 PPIHO43447 177 aaKnown RBP15.04■□□□□ -0
CCDC43-201ENST00000315286 CT45A6P0DMU7 189 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 CT45A5P0DMU8 189 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 CT45A7P0DMV0 189 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 RPS16P62249 146 aaKnown RBP15.04■□□□□ -0
CCDC43-201ENST00000315286 RELBQ01201 579 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 SEC11CQ9BY50 192 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 CARHSP1Q9Y2V2 147 aaKnown RBP15.04■□□□□ -0
CCDC43-201ENST00000315286 GPR37O15354 613 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 NDUFA2O43678 99 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 SFTA3P0C7M3 94 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 GUK1Q16774 197 aa15.04■□□□□ -0
CCDC43-201ENST00000315286 WDR61Q9GZS3 305 aaKnown RBP15.04■□□□□ -0
CCDC43-201ENST00000315286 DCHS2Q6V1P9 2916 aa15.03■□□□□ -0
CCDC43-201ENST00000315286 CCL20P78556 96 aa15.03■□□□□ -0
CCDC43-201ENST00000315286 SPSB3Q6PJ21 355 aa15.03■□□□□ -0
CCDC43-201ENST00000315286 PUSL1Q8N0Z8 303 aaKnown RBP15.03■□□□□ -0
CCDC43-201ENST00000315286 RHOVQ96L33 236 aa15.03■□□□□ -0
CCDC43-201ENST00000315286 UBE2L5PA0A1B0GUS4 154 aa15.02■□□□□ -0
CCDC43-201ENST00000315286 F12P00748 615 aaPredicted RBP15.02■□□□□ -0
CCDC43-201ENST00000315286 SPCS3P61009 180 aa15.02■□□□□ -0
CCDC43-201ENST00000315286 SVBPQ8N300 66 aa15.02■□□□□ -0
CCDC43-201ENST00000315286 NKX6-2Q9C056 277 aaPredicted RBP15.02■□□□□ -0
CCDC43-201ENST00000315286 HRNRQ86YZ3 2850 aaPredicted RBP15.02■□□□□ -0
CCDC43-201ENST00000315286 H2AFB1P0C5Y9 115 aa15.02□□□□□ -0.01
CCDC43-201ENST00000315286 OR8U8P0C7N1 319 aa15.02□□□□□ -0.01
CCDC43-201ENST00000315286 OR10P1Q8NGE3 313 aa15.02□□□□□ -0.01
CCDC43-201ENST00000315286 PARD6GQ9BYG4 376 aaPredicted RBP15.02□□□□□ -0.01
CCDC43-201ENST00000315286 EIF5A2Q9GZV4 153 aaKnown RBP15.02□□□□□ -0.01
CCDC43-201ENST00000315286 DLX6P56179 175 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 OR4A47Q6IF82 309 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 ZNF833PQ6ZTB9 187 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 OR52E5Q8NH55 327 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 TAF15Q92804 592 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC43-201ENST00000315286 PSMG3Q9BT73 122 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-201ENST00000315286 MALRD1Q5VYJ5 2156 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 C15orf62A8K5M9 175 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 PPOXP50336 477 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 PEA15Q15121 130 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 ATP6V1FQ16864 119 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 TMEM155Q4W5P6 130 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 SP5Q6BEB4 398 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-201ENST00000315286 LFNGQ8NES3 379 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 VSIRQ9H7M9 311 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 RPRMQ9NS64 109 aa15.01□□□□□ -0.01
CCDC43-201ENST00000315286 NUPL2O15504 423 aaKnown RBP15□□□□□ -0.01
CCDC43-201ENST00000315286 IGKV1-16P04430 117 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 PPT1P50897 306 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 GNB2P62879 340 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 TAGLNQ01995 201 aaKnown RBP15□□□□□ -0.01
CCDC43-201ENST00000315286 PDLIM3Q53GG5 364 aaPredicted RBP15□□□□□ -0.01
CCDC43-201ENST00000315286 DPPA3Q6W0C5 159 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 ZNF429Q86V71 674 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 SFT2D1Q8WV19 159 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 PINX1Q96BK5 328 aaKnown RBP15□□□□□ -0.01
CCDC43-201ENST00000315286 TMEM147Q9BVK8 224 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 SLC35D1Q9NTN3 355 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 TNCP24821 2201 aa15□□□□□ -0.01
CCDC43-201ENST00000315286 HRASP01112 189 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 VDAC2P45880 294 aaPredicted RBP14.99□□□□□ -0.01
CCDC43-201ENST00000315286 TLE4Q04727 773 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 HNF4GQ14541 408 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 C15orf61A6NNL5 157 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 DNASE2O00115 360 aaPredicted RBP14.99□□□□□ -0.01
CCDC43-201ENST00000315286 ARG1P05089 322 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 POU2AF1Q16633 256 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 RTL8BQ17RB0 113 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 C11orf42Q8N5U0 333 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 OR13D1Q8NGV5 346 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 MRPL20Q9BYC9 149 aaKnown RBP14.99□□□□□ -0.01
CCDC43-201ENST00000315286 HEYLQ9NQ87 328 aaPredicted RBP14.99□□□□□ -0.01
CCDC43-201ENST00000315286 TCF19Q9Y242 345 aa14.99□□□□□ -0.01
CCDC43-201ENST00000315286 SRRM4A7MD48 611 aaKnown RBP14.98□□□□□ -0.01
CCDC43-201ENST00000315286 J3QR06 171 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 LY6HO94772 140 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 IGHV2-70P01814 119 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 UQCRFS1P47985 274 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 SERF2P84101 59 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 AVPI1Q5T686 147 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 RAB39BQ96DA2 213 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 RARRES2Q99969 163 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 PBDC1Q9BVG4 233 aa14.98□□□□□ -0.01
CCDC43-201ENST00000315286 RALYQ9UKM9 306 aaKnown RBP14.98□□□□□ -0.01
CCDC43-201ENST00000315286 FAM74A7A6NL05 159 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 LY86O95711 162 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 REG1BP48304 166 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 ZNF841Q6ZN19 808 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 OR10X1Q8NGY0 326 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 ZNF596Q8TC21 504 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 CLCC1Q96S66 551 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 HIPK2Q9H2X6 1198 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 CBLN4Q9NTU7 201 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 TMEM14BQ9NUH8 114 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms